| ADHADH1 |
— |
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AcAld + NADH = NAD + EtOH
(ADH1*ADHADH1kcat*(-((EtOH*NAD)/(ADHADH1Kacald*ADHADH1Kinadh*KeqADH)) + (AcAld*NADH)/(ADHADH1Kacald*ADHADH1Kinadh)))/(1 + (ADHADH1Knad*EtOH)/(ADHADH1Ketoh*ADHADH1Kinad) + (ADHADH1Knadh*AcAld)/(ADHADH1Kacald*ADHADH1Kinadh) + NAD/ADHADH1Kinad + (EtOH*NAD)/(ADHADH1Ketoh*ADHADH1Kinad) + (ADHADH1Knadh*AcAld*NAD)/(ADHADH1Kacald*ADHADH1Kinad*ADHADH1Kinadh) + (EtOH*AcAld*NAD)/(ADHADH1Ketoh*ADHADH1Kiacald*ADHADH1Kinad) + NADH/ADHADH1Kinadh + (ADHADH1Knad*EtOH*NADH)/(ADHADH1Ketoh*ADHADH1Kinad*ADHADH1Kinadh) + (AcAld*NADH)/(ADHADH1Kacald*ADHADH1Kinadh) + (EtOH*AcAld*NADH)/(ADHADH1Kacald*ADHADH1Kietoh*ADHADH1Kinadh))
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| ADHADH5 |
— |
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AcAld + NADH = NAD + EtOH
(ADH5*ADHADH5kcat*(-((EtOH*NAD)/(ADHADH5Kacald*ADHADH5Kinadh*KeqADH)) + (AcAld*NADH)/(ADHADH5Kacald*ADHADH5Kinadh)))/(1 + (ADHADH5Knad*EtOH)/(ADHADH5Ketoh*ADHADH5Kinad) + (ADHADH5Knadh*AcAld)/(ADHADH5Kacald*ADHADH5Kinadh) + NAD/ADHADH5Kinad + (EtOH*NAD)/(ADHADH5Ketoh*ADHADH5Kinad) + (ADHADH5Knadh*AcAld*NAD)/(ADHADH5Kacald*ADHADH5Kinad*ADHADH5Kinadh) + (EtOH*AcAld*NAD)/(ADHADH5Ketoh*ADHADH5Kiacald*ADHADH5Kinad) + NADH/ADHADH5Kinadh + (ADHADH5Knad*EtOH*NADH)/(ADHADH5Ketoh*ADHADH5Kinad*ADHADH5Kinadh) + (AcAld*NADH)/(ADHADH5Kacald*ADHADH5Kinadh) + (EtOH*AcAld*NADH)/(ADHADH5Kacald*ADHADH5Kietoh*ADHADH5Kinadh))
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| AK |
— |
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{2.0}ADP = AMP + ATP
AKk*(ADP^2 - (AMP*ATP)/AKKeq)
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| ATPase |
— |
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ATP = ADP
(ATPaseVmax*ATP)/(ATPaseKatp*(1 + ATP/ATPaseKatp))
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| ENOENO1 |
— |
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P2G = PEP
(ENO1*ENOENO1kcat*(P2G/ENOENO1Kp2g - PEP/(ENOENO1Kp2g*KeqENO)))/(1 + P2G/ENOENO1Kp2g + PEP/ENOENO1Kpep)
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| ENOENO2 |
— |
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P2G = PEP
(ENO2*ENOENO2kcat*(P2G/ENOENO2Kp2g - PEP/(ENOENO2Kp2g*KeqENO)))/(1 + P2G/ENOENO2Kp2g + PEP/ENOENO2Kpep)
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| FBA |
— |
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F16bP = DHAP + GAP
(FBA1*FBAkcat*(F16bP/FBAKf16bp - (DHAP*GAP)/(FBAKeq*FBAKf16bp)))/(1 + DHAP/FBAKdhap + F16bP/FBAKf16bp + GAP/FBAKgap + (DHAP*GAP)/(FBAKdhap*FBAKgap) + (F16bP*GAP)/(FBAKf16bp*FBAKigap))
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| GPD |
GPD |
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DHAP + NADH = G3P + NAD
GPDVmax * (-(G3P * NAD / GPDKeq) + DHAP * NADH) / (GPDKdhap * GPDKnadh * (1 + ADP / GPDKadp + ATP / GPDKatp + F16bP / GPDKfbp) * (1 + DHAP / GPDKdhap + G3P / GPDKg3p) * (1 + NAD / GPDKnad + NADH / GPDKnadh))
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| GPM |
— |
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P3G = P2G
(GPM1*GPMkcat*(-(P2G/(GPMKeq*GPMKp3g)) + P3G/GPMKp3g))/(1 + P2G/GPMKp2g + P3G/GPMKp3g)
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| GPP |
— |
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G3P = GLY
(GPPVmax*G3P)/(GPPKg3p*(1 + G3P/GPPKg3p))
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| HXKGLK1 |
— |
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ATP + GLC = ADP + G6P
(GLK1*HXKGLK1kcat*(-((ADP*G6P)/(HXKGLK1Katp*HXKGLK1Kglc*KeqHXK)) + (ATP*GLC)/(HXKGLK1Katp*HXKGLK1Kglc)))/((1 + ADP/HXKGLK1Kadp + ATP/HXKGLK1Katp)*(1 + G6P/HXKGLK1Kg6p + GLC/HXKGLK1Kglc))
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| HXKHXK1 |
HXKHXK1 |
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ATP + GLC = ADP + G6P
HXK1 * HXKHXK1kcat * (-(ADP * G6P / (HXKHXK1Katp * HXKHXK1Kglc * KeqHXK)) + ATP * GLC / (HXKHXK1Katp * HXKHXK1Kglc)) / ((1 + ADP / HXKHXK1Kadp + ATP / HXKHXK1Katp) * (1 + G6P / HXKHXK1Kg6p + GLC / HXKHXK1Kglc + T6P / HXKHXK1Kit6p))
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| HXKHXK2 |
HXKHXK2 |
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ATP + GLC = ADP + G6P
HXK2 * HXKHXK2kcat * (-(ADP * G6P / (HXKHXK2Katp * HXKHXK2Kglc * KeqHXK)) + ATP * GLC / (HXKHXK2Katp * HXKHXK2Kglc)) / ((1 + ADP / HXKHXK2Kadp + ATP / HXKHXK2Katp) * (1 + G6P / HXKHXK2Kg6p + GLC / HXKHXK2Kglc + T6P / HXKHXK2Kit6p))
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| HXT |
— |
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GLCx = GLC
(HXTVmax*(GLCx - GLC))/(HXTKglc*(1 + GLCx/HXTKglc + GLC/HXTKglc + (GLCx*HXTKi*GLC)/HXTKglc^2))
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| PDCPDC1 |
— |
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PYR = AcAld
(PDC1*PDCPDC1kcat*PYR)/(PDCPDC1Kpyr*(1 + PYR/PDCPDC1Kpyr))
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| PDCPDC5 |
— |
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PYR = AcAld
(PDC5*PDCPDC5kcat*PYR)/(PDCPDC5Kpyr*(1 + PYR/PDCPDC5Kpyr))
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| PDCPDC6 |
— |
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PYR = AcAld
(PDC6*PDCPDC6kcat*PYR)/(PDCPDC6Kpyr*(1 + PYR/PDCPDC6Kpyr))
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| PFK |
PFK |
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ATP + F6P = ADP + F16bP
PFKgR * PFKkcat * (PFK1 + PFK2 - Abs(PFK1 - PFK2)) * ATP * (1 - ADP * F16bP / (PFKKeq * ATP * F6P)) * F6P * (1 + ADP / PFKKadp + ATP / PFKKatp + F16bP / PFKKf16 + PFKgR * ADP * F16bP / (PFKKadp * PFKKf16) + F6P / PFKKf6p + PFKgR * ATP * F6P / (PFKKatp * PFKKf6p)) / (2 * PFKKatp * PFKKf6p * (PFKL0 * (1 + PFKCamp * AMP / PFKKamp)^2 * (1 + PFKCatp * ATP / PFKKatp)^2 * (1 + PFKCiatp * ATP / PFKKiatp)^2 * (1 + F26bP * PFKCf26 / PFKKf26 + PFKCf16 * F16bP / PFKKf16)^2 / ((1 + AMP / PFKKamp)^2 * (1 + ATP / PFKKiatp)^2 * (1 + F26bP / PFKKf26 + F16bP / PFKKf16)^2) + (1 + ADP / PFKKadp + ATP / PFKKatp + F16bP / PFKKf16 + PFKgR * ADP * F16bP / (PFKKadp * PFKKf16) + F6P / PFKKf6p + PFKgR * ATP * F6P / (PFKKatp * PFKKf6p))^2))
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| PGI |
— |
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G6P = F6P
(PGI1*PGIkcat*(-(F6P/(PGIKeq*PGIKg6p)) + G6P/PGIKg6p))/(1 + F6P/PGIKf6p + G6P/PGIKg6p)
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| PGK |
— |
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ADP + BPG = ATP + P3G
(PGK1*PGKkcat*(ADP/PGKKadp)^(-1 + PGKnHadp)*((ADP*BPG)/(PGKKadp*PGKKbpg) - (ATP*P3G)/(PGKKadp*PGKKbpg*PGKKeq)))/((1 + (ADP/PGKKadp)^PGKnHadp + ATP/PGKKatp)*(1 + BPG/PGKKbpg + P3G/PGKKp3g))
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| PGM |
— |
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G6P = G1P
(PGMVmax*rescaleTRH*(-(G1P/(PGMKeq*PGMKg6p)) + G6P/PGMKg6p))/(1 + G1P/PGMKg1p + G6P/PGMKg6p)
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| PYKCDC19 |
PYKCDC19 |
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ADP + PEP = ATP + PYR
CDC19 * PYKCDC19kcat * (ADP * PEP - ATP * PYR / KeqPYK) / (PYKCDC19Kadp * PYKCDC19Kpep * (1 + ADP / PYKCDC19Kadp + ATP / PYKCDC19Katp) * (1 + PYKCDC19L0 * (1 + ATP / PYKCDC19Kiatp) / (1 + F16bP / PYKCDC19Kf16p) + PEP / PYKCDC19Kpep + PYR / PYKCDC19Kpyr))
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| PYKPYK2 |
PYKPYK2 |
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ADP + PEP = ATP + PYR
PYK2 * PYKPYK2kcat * (ADP * PEP - ATP * PYR / KeqPYK) / (PYKPYK2Kadp * PYKPYK2Kpep * (1 + ADP / PYKPYK2Kadp + ATP / PYKPYK2Katp) * (1 + PYKPYK2L0 * (1 + ATP / PYKPYK2Kiatp) / (1 + F16bP / PYKPYK2Kf16p) + PEP / PYKPYK2Kpep + PYR / PYKPYK2Kpyr))
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| TDHTDH1 |
— |
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GAP + NAD = BPG + NADH
(TDH1*TDHTDH1kcat*((GAP*NAD)/(TDHTDH1Kgap*TDHTDH1Knad) - (BPG*NADH)/(KeqTDH*TDHTDH1Kgap*TDHTDH1Knad)))/((1 + BPG/TDHTDH1Kbpg + GAP/TDHTDH1Kgap)*(1 + NAD/TDHTDH1Knad + NADH/TDHTDH1Knadh))
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| TDHTDH2 |
— |
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GAP + NAD = BPG + NADH
(TDH2*TDHTDH2kcat*((GAP*NAD)/(TDHTDH2Kgap*TDHTDH2Knad) - (BPG*NADH)/(KeqTDH*TDHTDH2Kgap*TDHTDH2Knad)))/((1 + BPG/TDHTDH2Kbpg + GAP/TDHTDH2Kgap)*(1 + NAD/TDHTDH2Knad + NADH/TDHTDH2Knadh))
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| TDHTDH3 |
— |
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GAP + NAD = BPG + NADH
(TDH3*TDHTDH3kcat*((GAP*NAD)/(TDHTDH3Kgap*TDHTDH3Knad) - (BPG*NADH)/(KeqTDH*TDHTDH3Kgap*TDHTDH3Knad)))/((1 + BPG/TDHTDH3Kbpg + GAP/TDHTDH3Kgap)*(1 + NAD/TDHTDH3Knad + NADH/TDHTDH3Knadh))
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| TPI |
— |
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DHAP = GAP
TPIk*(DHAP - GAP/TPIKeq)
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| TPP |
— |
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T6P = TRH
(rescaleTRH*TPPVmax*T6P)/(TPPKt6p*(1 + T6P/TPPKt6p))
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| TPS |
— |
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G6P + UDG = T6P + UDP
(rescaleTRH*TPSVmax*G6P*UDG)/(TPSKg6p*TPSKudg*(1 + G6P/TPSKg6p)*(1 + UDG/TPSKudg))
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| UGP |
— |
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G1P + UTP = UDG
(rescaleTRH*UGPVmax*G1P*UTP)/(UGPKg1p*UGPKutp*(UGPKiutp/UGPKutp + G1P/UGPKg1p + (UGPKiutp*UDG)/(UGPKiudg*UGPKutp) + (G1P*UDG)/(UGPKg1p*UGPKiudg) + UTP/UGPKutp + (G1P*UTP)/(UGPKg1p*UGPKutp)))
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| acetatebranch |
— |
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AcAld + NAD = NADH + ACE
acetatebranchk*AcAld*NAD
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| succinatebranch |
— |
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PYR + {3.0}NAD = {0.75}SUC + {3.0}NADH
succinatebranchk*NAD*PYR
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| udptoutp |
— |
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ATP + UDP = ADP + UTP
rescaleTRH*udptoutpk*ATP*UDP
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