#wu1 #reactions reaction_0000005: $pool = {1.0}c cell * fcyt * (jmem + jer) reaction_0000006: $pool = {1.0}cer -fer * vcytver * jer * cell #parameters alpha = 4.5e-06 cm = 5300.0 dact = 0.35 dinact = 0.4 dip3 = 0.5 fcyt = 0.01 fer = 0.01 gca = 1000.0 gir = 5.0 gk = 1400.0 gkatp = 500.0 gkca = 900.0 ip3 = 0.0 kd = 0.3 kpmca = 0.2 kserca = 0.4 pleak = 0.0005 r = 0.14 sa = 0.1 sm = 12.0 sn = 5.0 taua = 300000.0 taun = 16.0 vca = 50.0 vcytver = 5.0 vir = -75.0 vk = -75.0 vm = -20.0 vn = -16.0 cell = 1.0 #initial values c = 0.1 cer = 100.0 V = -60.0 a = 0.46 n = 0.01 rIR = 0.282 nIR = 0.008 #assignment rules !F nIRinf = 1.0 / (1.0 + betaIRn / alphaIRn) !F betaIRn = 0.00035 * exp(0.07 * (V + 25.0)) !F alphaIRn = 0.09 / (1.0 + exp(0.11 * (V + 100.0))) !F oinf = c / (dact + c) * (ip3 / (dip3 + ip3)) * (dinact / (dinact + c)) !F jleak = pleak * (cer - c) !F jserca = kserca * c !F jmem = -(alpha * ica + kpmca * c) !F ikca = gkca * w * (V - vk) !F ainf = 1.0 / (1.0 + exp((r - c) / sa)) !F ninf = 1.0 / (1.0 + exp((vn - V) / sn)) !F ica = gca * minf * (V - vca) !F ikatp = gkatp * a * (V - vk) !F w = pow(c, 5.0) / (pow(c, 5.0) + pow(kd, 5.0)) !F ik = gk * n * (V - vk) !F minf = 1.0 / (1.0 + exp((vm - V) / sm)) !F tauIRr = 1.0 / (alphaIRr + betaIRr) !F rIRinf = 1.0 / (1.0 + betaIRr / alphaIRr) !F betaIRr = 0.15 / (1.0 + exp(-0.05 * (V + 120.0))) !F alphaIRr = 30.0 / (1.0 + exp(0.04 * (V + 230.0))) !F tauIRn = 1.0 / (alphaIRn + betaIRn) !F iir = gir * nIR * rIR * (V - vir) !F jer = jleak + jip3 - jserca !F jip3 = oinf * (cer - c)