begin name
pritchart1
end name

begin reactions
Calloseproduction {1.0}PRR = {1.0}PRR + {1.0}Callose
Calloseremoval {1.0}Callose = {1.0}$EXTERNAL
Callosesuppression {1.0}Callose + {1.0}Eint = {1.0}Eint
ETI {1.0}Path + {1.0}R0 = {1.0}R0
Eintremoval {1.0}Eint = {1.0}$EXTERNAL
Effectorproduction {1.0}Path = {1.0}E + {1.0}Path
Effectorrecognition {1.0}R + {1.0}Eint = {1.0}R0
Effectorremoval {1.0}E = {1.0}$EXTERNAL
Effectortranslocation {1.0}E = {1.0}Eint
PAMPproduction {1.0}Path = {1.0}PAMP + {1.0}Path
PAMPrecognition {1.0}PRR0 + {1.0}PAMP = {1.0}PRR
PAMPremoval {1.0}PAMP = {1.0}$EXTERNAL
PTI {1.0}Path + {1.0}Callose = {1.0}Callose
Pathogenarrival {1.0}Pathbulk = {1.0}Pathbulk + {1.0}Path
Pathogenremoval {1.0}Path = {1.0}$EXTERNAL
end reactions

begin rate equations
Calloseproduction = Calloseproductionk1*PRR[t]
Calloseremoval = Calloseremovalk1*Cell*Callose[t]
Callosesuppression = Callosesuppressionk1*Cell*Callose[t]*Eint[t]
ETI = ETIk1*Path[t]*R0[t]
Eintremoval = Cell*Eintremovalk1*Eint[t]
Effectorproduction = Apoplast*Effectorproductionk1*Path[t]
Effectorrecognition = Cell*(Effectorrecognitionk1*Eint[t]*R[t] - Effectorrecognitionk2*R0[t])
Effectorremoval = Apoplast*Effectorremovalk1*E[t]
Effectortranslocation = Competitiveinhibitionirr[E[t], Callose[t], EffectortranslocationKm, EffectortranslocationV, EffectortranslocationKi]
PAMPproduction = PAMPproductionk1*Path[t]
PAMPrecognition = -(PAMPrecognitionk2*PRR[t]) + PAMPrecognitionk1*PAMP[t]*PRR0[t]
PAMPremoval = Cell*PAMPremovalk1*PAMP[t]
PTI = PTIk1*Callose[t]*Path[t]
Pathogenarrival = Apoplast*Pathogenarrivalk1*Pathbulk[t]
Pathogenremoval = Apoplast*Pathogenremovalk1*Path[t]
end rate equations

begin parameters
PAMPrecognitionk1 = 0.1
PAMPrecognitionk2 = 0.1
Effectorrecognitionk1 = 0.1
Effectorrecognitionk2 = 0.1
Effectorremovalk1 = 0.1
PAMPremovalk1 = 0.1
Pathogenarrivalk1 = 0.1
Pathogenremovalk1 = 0.1
PAMPproductionk1 = 0.1
Effectorproductionk1 = 0.1
Eintremovalk1 = 0.1
ETIk1 = 0.1
EffectortranslocationKm = 0.1
EffectortranslocationV = 0.1
EffectortranslocationKi = 0.1
Calloseproductionk1 = 0.1
Calloseremovalk1 = 0.1
PTIk1 = 0.1
Callosesuppressionk1 = 0.1
Apoplast = 1.0
Cell = 1.0
end parameters

begin initial conditions
Callose[0] = Callosei
E[0] = Ei
Eint[0] = Einti
PAMP[0] = PAMPi
PRR[0] = PRRi
PRR0[0] = PRR0i
Path[0] = Pathi
Pathbulk[0] = Pathbulki
R[0] = Ri
R0[0] = R0i
end initial conditions

begin initial values
Callosei = 0.0
Ei = 0.0
Einti = 0.0
PAMPi = 0.0
PRRi = 0.0
PRR0i = 1.0
Pathi = 0.0
Pathbulki = 0.0
Ri = 1.0
R0i = 0.0
end initial values

begin assignment rules
end assignment rules

begin function definitions
Competitiveinhibitionirr[substrate_,Inhibitor_,Km_,V_,Ki_] := (substrate*V)/(Km + (Inhibitor*Km)/Ki + substrate)
end function definitions

begin events
Pathogen_introduced = (t > 10, {Pathbulk[t] -> 1}, 0)
end events

begin process annotations
end process annotations

begin species annotations
end species annotations

begin units
end units