#mosca1 FIX: species_20 species_21 species_23 species_24 species_25 species_26 species_32 species_33 species_34 species_9 #reactions reaction_1: {1.0}species_9 = {1.0}species_1 compartment_1 * GLUT(parameter_30, species_9, species_1, keq, KGlc_e, KGlc) reaction_10: {1.0}species_17 + {1.0}species_16 = {1.0}species_5 + {1.0}species_7 compartment_1 * TAL(Vmax, species_17, species_16, species_7, species_5, Keq_TAL, K1, K2, K6, K3, K5, K4, K7) reaction_11: {1.0}species_15 + {1.0}species_4 = {1.0}species_20 + {1.0}species_21 compartment_1 * PRPPS(Vmax, species_15, species_4, species_21, species_20, Kapp, KATP, KR5P) reaction_12: {1.0}species_22 = {1.0}species_2 compartment_1 * PGLM(parameter_55, species_22, parameter_57, parameter_15, species_2, parameter_56) reaction_13: {1.0}species_24 + {1.0}species_23 = {1.0}species_24 + {1.0}species_22 compartment_1 * GPa(parameter_58, species_24, species_23, parameter_61, parameter_62, parameter_4, species_22, KGLYb, parameter_60, KiPi, parameter_59) reaction_14: {1.0}species_6 = {1.0}species_16 + {1.0}species_27 compartment_1 * FBA(parameter_37, species_6, parameter_70, parameter_8, species_27, species_16, parameter_68, parameter_69) reaction_15: {1.0}species_16 = {1.0}species_27 compartment_1 * TPI(parameter_38, species_16, parameter_72, parameter_9, species_27, parameter_71) reaction_16: {1.0}species_16 + {1.0}species_19 + {1.0}species_23 = {1.0}species_12 compartment_1 * GAPDH(parameter_39, species_19, species_16, species_23, parameter_76, parameter_75, parameter_77, parameter_10, species_12, species_18, parameter_73, parameter_74) reaction_17: {1.0}species_12 = {1.0}species_28 + {1.0}species_4 compartment_1 * PGK(parameter_40, species_12, species_3, alfa, parameter_51, parameter_52, parameter_11, species_28, species_4, beta, parameter_49, parameter_50) reaction_18: {1.0}species_24 + {1.0}species_23 = {1.0}species_24 + {1.0}species_22 compartment_1 * GPb(parameter_63, species_24, species_23, parameter_66, KPi, parameter_7, species_22, parameter_64, parameter_65, parameter_67, KiG1P, parameter_27, nH, Kamp) reaction_19: {1.0}species_22 + {1.0}species_4 = {1.0}species_24 + {2.0}species_23 compartment_1 * GS(parameter_41, Kf, parameter_17, species_22, species_4, species_24, species_23, species_3, Keq, Kr) reaction_2: {1.0}species_1 + {1.0}species_4 = {1.0}species_2 compartment_1 * HK(parameter_31, Ka, Kb, species_1, species_4, species_2, species_3, Kapp, Kp, Kq) reaction_20: {1.0}species_5 + {1.0}species_4 = {1.0}species_6 compartment_1 * PFK(parameter_42, parameter_17, species_4, Katp, beta, species_26, alfa, Kf26bp, species_5, Kf6p, L, species_25, Kcit, Kiatp, species_3, species_6, Kadp, Kfbp, Kapp) reaction_21: {1.0}species_28 = {1.0}species_29 compartment_1 * function_1(parameter_78, species_28, parameter_80, parameter_22, species_29, parameter_79) reaction_22: {1.0}species_29 = {1.0}species_30 compartment_1 * function_2(parameter_43, species_29, parameter_54, parameter_24, species_30, parameter_53) reaction_23: {1.0}species_30 = {1.0}species_31 + {1.0}species_4 compartment_1 * function_3(parameter_44, species_3, Kadp, species_30, Kpep, L, species_4, Kiatp, species_6, Kfbp, species_31, Katp, Kpyr, Kapp, parameter_17) reaction_24: {1.0}species_31 = {1.0}species_32 + {1.0}species_19 compartment_1 * function_4(parameter_45, species_18, species_31, alfa, parameter_85, parameter_86, parameter_26, species_32, species_19, beta, parameter_83, parameter_84) reaction_25: $pool = {1.0}species_4 + {1.0}species_20 compartment_1 * function_5(Vf, species_3, species_4, species_20, Keq) reaction_26: $pool = {1.0}species_19 compartment_1 * function_6(parameter_46, species_18, species_19, Keq) reaction_27: {1.0}species_11 = $pool compartment_1 * function_7(parameter_47, species_11, species_10, Keq) reaction_28: {0.08}species_31 + {0.2}species_34 + {1.0}species_23 = {0.24}species_33 + {1.0}species_4 compartment_1 * function_8(parameter_48, species_31, y, species_23, species_3, species_34, species_4, species_33, Keq) reaction_29: {1.0}species_4 = {1.0}species_23 compartment_1 * k1 * species_4 reaction_3: {1.0}species_2 = {1.0}species_5 compartment_1 * PGI(parameter_32, species_2, parameter_82, parameter_13, species_5, parameter_81, species_7, Kery4p, species_6, Kfbp, species_8, Kpg) reaction_4: {1.0}species_2 = {1.0}species_8 + {1.0}species_11 compartment_1 * G6PDH(parameter_33, KG6P, KNADP, species_2, species_10, species_8, species_11, Kapp, species_4, KATP, KNADPH, species_12, KPGA23) reaction_5: {1.0}species_8 = {1.0}species_13 + {1.0}species_11 compartment_1 * PGDH(parameter_34, K6PG1, KNADP, species_8, species_10, species_13, species_11, Kapp, species_12, KPGA23, species_4, KATP, K6PG2, KNADPH) reaction_6: {1.0}species_13 = {1.0}species_14 compartment_1 * RUPE(Vmax, species_13, species_14, Keq_RUPE, KRu5P, KX5P) reaction_7: {1.0}species_13 = {1.0}species_15 compartment_1 * R5PI(Vmax, species_13, species_15, Keq_R5PI, KRu5P, KR5P) reaction_8: {1.0}species_15 + {1.0}species_14 = {1.0}species_16 + {1.0}species_17 compartment_1 * TKL(parameter_35, species_15, species_14, species_16, species_17, Keq_TKL, K1, K2, K6, K3, K5, K4, K7) reaction_9: {1.0}species_14 + {1.0}species_7 = {1.0}species_16 + {1.0}species_5 compartment_1 * TKL2(parameter_36, species_7, species_14, species_16, species_5, Keq_TKL2, K1, K2, K6, K3, K5, K4, K7) #parameters parameter_1 = 0.0114 parameter_12 = 0.0018 parameter_14 = 0.0556 parameter_16 = 17.2 parameter_17 = 1000.0 parameter_18 = 0.381 parameter_19 = 0.3574 parameter_2 = 1.932e-05 parameter_20 = 11.369 parameter_21 = 1.6491 parameter_23 = 1.4127 parameter_25 = 3452.5 parameter_28 = 1.0 parameter_29 = 1.0 parameter_3 = 0.001345 parameter_49 = 0.00013 parameter_5 = 0.42 parameter_50 = 0.00027 parameter_51 = 7.9e-05 parameter_52 = 4e-05 parameter_53 = 6e-05 parameter_54 = 3.8e-05 parameter_55 = 7.364 parameter_56 = 3e-05 parameter_57 = 6.3e-05 parameter_58 = 0.03347 parameter_59 = 0.00015 parameter_6 = 16.62 parameter_60 = 0.0101 parameter_61 = 0.0017 parameter_62 = 0.004 parameter_63 = 0.01049 parameter_64 = 0.0044 parameter_65 = 0.0015 parameter_66 = 0.015 parameter_67 = 0.0046 parameter_68 = 8e-05 parameter_69 = 0.00016 parameter_70 = 9e-06 parameter_71 = 0.0016 parameter_72 = 0.00051 parameter_73 = 2.2e-05 parameter_74 = 1e-05 parameter_75 = 0.00019 parameter_76 = 9e-05 parameter_77 = 0.029 parameter_78 = 154.0 parameter_79 = 0.00012 parameter_80 = 0.00019 parameter_81 = 5e-05 parameter_82 = 0.0004 parameter_83 = 0.0047 parameter_84 = 7e-05 parameter_85 = 2e-06 parameter_86 = 0.0003 species_20 = 0.00311 species_21 = 0.001 species_23 = 0.02 species_24 = 0.208403745497308 species_25 = 0.00108 species_26 = 3.67e-06 species_32 = 0.0155 species_33 = 0.0214 species_34 = 6.5e-05 species_9 = 0.01 reaction_23_Kadp = 0.4 reaction_23_Kpep = 0.014 reaction_23_L = 1.0 reaction_1_keq = 1.0 reaction_1_KGlc_e = 0.01 reaction_1_KGlc = 0.0093 reaction_2_Ka = 0.0001 reaction_2_Kb = 0.0011 reaction_2_Kapp = 651.0 reaction_2_Kp = 2e-05 reaction_2_Kq = 0.0035 reaction_3_Kery4p = 1e-06 reaction_3_Kfbp = 6e-05 reaction_3_Kpg = 1.5e-05 reaction_4_KG6P = 6.67e-08 reaction_4_KNADP = 3.67e-09 reaction_4_Kapp = 2000.0 reaction_4_KATP = 7.49e-07 reaction_4_KNADPH = 3.12e-09 reaction_4_KPGA23 = 2.289e-06 reaction_5_K6PG1 = 1e-08 reaction_5_KNADP = 1.8e-08 reaction_5_Kapp = 141.7 reaction_5_KPGA23 = 1.2e-07 reaction_5_KATP = 1.54e-07 reaction_5_K6PG2 = 5.8e-08 reaction_5_KNADPH = 4.5e-09 reaction_6_Vmax = 1.471 reaction_6_Keq_RUPE = 2.7 reaction_6_KRu5P = 1.9e-07 reaction_6_KX5P = 5e-07 reaction_7_Vmax = 0.7646 reaction_7_Keq_R5PI = 3.0 reaction_7_KRu5P = 7.8e-07 reaction_7_KR5P = 2.2e-06 reaction_8_Keq_TKL = 2.08 reaction_8_K1 = 4.177e-07 reaction_8_K2 = 3.055e-07 reaction_8_K6 = 0.00774 reaction_8_K3 = 1.2432e-05 reaction_8_K5 = 0.41139 reaction_8_K4 = 4.96e-09 reaction_8_K7 = 48.8 reaction_9_Keq_TKL2 = 29.7 reaction_9_K1 = 1.84e-09 reaction_9_K2 = 3.055e-07 reaction_9_K6 = 0.122 reaction_9_K3 = 5.48e-08 reaction_9_K5 = 0.0287 reaction_9_K4 = 3e-10 reaction_9_K7 = 0.215 reaction_10_Vmax = 58.27 reaction_10_Keq_TAL = 2.703 reaction_10_K1 = 8.23e-09 reaction_10_K2 = 4.765e-08 reaction_10_K6 = 0.4653 reaction_10_K3 = 1.733e-07 reaction_10_K5 = 0.8683 reaction_10_K4 = 6.095e-09 reaction_10_K7 = 2.524 reaction_11_Vmax = 0.5104 reaction_11_Kapp = 100000.0 reaction_11_KATP = 3e-08 reaction_11_KR5P = 5.7e-07 reaction_13_KGLYb = 0.00015 reaction_13_KiPi = 0.0047 reaction_17_alfa = 1.0 reaction_17_beta = 1.0 reaction_18_KPi = 0.0002 reaction_18_KiG1P = 0.0074 reaction_18_nH = 1.75 reaction_18_Kamp = 1.9e-12 reaction_19_Kf = 17400.0 reaction_19_Keq = 267100.0 reaction_19_Kr = 158.0 reaction_20_Katp = 2.1e-05 reaction_20_beta = 0.98 reaction_20_alfa = 0.32 reaction_20_Kf26bp = 8.4e-07 reaction_20_Kf6p = 1.0 reaction_20_L = 4.1 reaction_20_Kcit = 6.8 reaction_20_Kiatp = 20.0 reaction_20_Kadp = 5.0 reaction_20_Kfbp = 5.0 reaction_20_Kapp = 247.0 reaction_23_Kiatp = 2.5 reaction_23_Kfbp = 0.0004 reaction_23_Katp = 0.86 reaction_23_Kpyr = 10.0 reaction_23_Kapp = 195172.0 reaction_24_alfa = 1.0 reaction_24_beta = 1.0 reaction_25_Vf = 141.2 reaction_25_Keq = 2.26 reaction_26_Keq = 300.0 reaction_27_Keq = 0.2 reaction_28_y = 12.5 reaction_28_Keq = 1000000.0 reaction_29_k1 = 6210.0 compartment_1 = 1.0 #initial values species_1 = 0.000897 species_11 = 1.87082e-05 species_12 = 6.29e-05 species_13 = 0.000143 species_14 = 0.000242 species_15 = 2.74e-05 species_16 = 0.000153 species_17 = 8.58e-05 species_19 = 0.00134 species_2 = 0.00109 species_22 = 3.41e-05 species_27 = 0.000553 species_28 = 3.07e-05 species_29 = 4.98e-06 species_30 = 5.79e-05 species_31 = 0.00183 species_4 = 0.0087 species_5 = 3.62e-05 species_6 = 0.000367 species_7 = 0.00093 species_8 = 0.0001 #assignment rules !F parameter_34 = 31.02 * parameter_28 !F parameter_48 = 9801000.0 * parameter_29 !F parameter_11 = parameter_40 * parameter_49 * parameter_50 / (parameter_51 * parameter_52 * parameter_20) !F parameter_42 = 107.6 * parameter_28 !F parameter_41 = 32040.0 * parameter_28 !F parameter_10 = parameter_39 * parameter_73 * parameter_74 / (parameter_75 * parameter_76 * parameter_77 * parameter_19) !F parameter_39 = 109.1 * parameter_28 !F parameter_9 = parameter_38 * parameter_71 / (parameter_72 * parameter_18) !F parameter_38 = 5.976 * parameter_28 !F parameter_8 = parameter_37 * parameter_68 * parameter_69 / (parameter_12 * parameter_70) !F parameter_37 = 14.63 * parameter_28 !F parameter_7 = parameter_63 * parameter_64 * parameter_65 / (parameter_66 * parameter_67 * parameter_6) !F parameter_4 = parameter_58 * parameter_59 * parameter_60 / (parameter_61 * parameter_62 * parameter_5) !F parameter_26 = parameter_45 * parameter_83 * parameter_84 / (parameter_85 * parameter_86 * parameter_25) !F parameter_45 = 340.3 * parameter_28 !F parameter_27 = species_20 !F parameter_13 = parameter_32 * (parameter_81 / (parameter_82 * parameter_14)) !F parameter_32 = 7778.0 * parameter_28 !F parameter_33 = 1.008 * parameter_28 !F parameter_31 = 86.85 * parameter_28 !F parameter_22 = parameter_78 * parameter_79 / (parameter_80 * parameter_21) !F parameter_46 = 4982000.0 * parameter_28 !F species_18 = parameter_3 - species_19 !F species_3 = parameter_1 - species_4 !F species_10 = parameter_2 - species_11 !F parameter_47 = 127800.0 * parameter_28 !F parameter_15 = parameter_55 * parameter_56 / (parameter_57 * parameter_16) !F parameter_24 = parameter_43 * parameter_53 / (parameter_54 * parameter_23) !F parameter_43 = 160.9 * parameter_28 !F parameter_44 = 27.81 * parameter_28 !F parameter_35 = 1056.0 * parameter_28 !F parameter_36 = 0.1761 * parameter_28 !F parameter_40 = 73.41 * parameter_28 !F parameter_30 = 23.03 * parameter_28