begin name messiha2 end name begin reactions vE4Psink {1.0}E4P = {1.0}$EXTERNAL vGND {1.0}P6G = {1.0}NADPH + {1.0}Ru5P vNADPHoxidase {1.0}NADPH = {1.0}$EXTERNAL vR5Psink {1.0}R5P = {1.0}$EXTERNAL vRKI {1.0}Ru5P = {1.0}R5P vRPE {1.0}Ru5P = {1.0}X5P vSOL {1.0}G6L = {1.0}P6G vTAL {1.0}S7P = {1.0}E4P vTKLE4P {1.0}E4P + {1.0}X5P = {1.0}$EXTERNAL vTKLR5P {1.0}R5P + {1.0}X5P = {1.0}S7P vZWF {1.0}$EXTERNAL = {1.0}G6L + {1.0}NADPH end reactions begin rate equations vE4Psink = E4Psinkk*E4P[t] vGND = (GND1*kcatGND1*NADP*P6G[t])/(KnadpGND1*Kp6gGND1*(1 + NADP/KnadpGND1 + NADPH[t]/KnadphGND1)*(1 + P6G[t]/Kp6gGND1 + Ru5P[t]/Kru5pGND1)) + (GND2*kcatGND2*NADP*P6G[t])/((1 + NADP/KnadpGND2 + NADPH[t]/KnadphGND2)*(1 + P6G[t]/Kp6gGND2 + Ru5P[t]/Kru5pGND2)) vNADPHoxidase = NADPHoxidasek*NADPH[t] vR5Psink = R5Psinkk*R5P[t] vRKI = (RKI1*RKIkcat*(-(R5P[t]/RKIKeq) + Ru5P[t]))/(RKIKru5p*(1 + R5P[t]/RKIKr5p + Ru5P[t]/RKIKru5p)) vRPE = (RPE1*RPEkcat*(Ru5P[t] - X5P[t]/RPEKeq))/(RPEKru5p*(1 + Ru5P[t]/RPEKru5p + X5P[t]/RPEKx5p)) vSOL = (SOL3*SOLkcat*G6L[t])/(SOLKg6l*(1 + G6L[t]/SOLKg6l + P6G[t]/SOLKp6g)) vTAL = (kcatTAL1*TAL1*(-((F6P*E4P[t])/TALKeq) + GAP*S7P[t]))/((1 + F6P/Kf6pTAL1 + GAP/KgapTAL1)*KgapTAL1*Ks7pTAL1*(1 + E4P[t]/Ke4pTAL1 + S7P[t]/Ks7pTAL1)) + (NQM1*TALkcatNQM1*(-((F6P*E4P[t])/TALKeq) + GAP*S7P[t]))/((1 + F6P/TALKf6pNQM1 + GAP/TALKgapNQM1)*TALKgapNQM1*TALKs7pNQM1*(1 + E4P[t]/TALKe4pNQM1 + S7P[t]/TALKs7pNQM1)) vTKLE4P = (TKL1*TKLE4Pkcat*(-((F6P*GAP)/TKLE4PKeq) + E4P[t]*X5P[t]))/(Ke4pTAL*Kx5pTAL*(1 + F6P/Kf6pTAL + E4P[t]/Ke4pTAL + R5P[t]/Kr5pTAL + S7P[t]/Ks7pTAL)*(1 + GAP/KgapTAL + X5P[t]/Kx5pTAL)) vTKLR5P = (TKL1*TKLR5Pkcat*(-((GAP*S7P[t])/TKLR5PKeq) + R5P[t]*X5P[t]))/(Kr5pTAL*Kx5pTAL*(1 + F6P/Kf6pTAL + E4P[t]/Ke4pTAL + R5P[t]/Kr5pTAL + S7P[t]/Ks7pTAL)*(1 + GAP/KgapTAL + X5P[t]/Kx5pTAL)) vZWF = (G6P*NADP*ZWF1*ZWFkcat)/(ZWFKg6p*ZWFKnadp*(1 + G6P/ZWFKg6p + G6L[t]/ZWFKg6l)*(1 + NADP/ZWFKnadp + NADPH[t]/ZWFKnadph)) end rate equations begin parameters E4Psinkk = 1.0 EXTERNAL = 0.0 F6P = 0.325 GAP = 0.067 GND1 = 0.013 GND2 = 0.003 Ke4pTAL = 0.946 Ke4pTAL1 = 0.362 Kf6pTAL = 1.1 Kf6pTAL1 = 1.44 KgapTAL = 0.1 KgapTAL1 = 0.272 KnadpGND1 = 0.094 KnadpGND2 = 0.094 KnadphGND1 = 0.055 KnadphGND2 = 0.055 Kp6gGND1 = 0.062 Kp6gGND2 = 0.115 Kr5pTAL = 0.235 Kru5pGND1 = 0.1 Kru5pGND2 = 0.1 Ks7pTAL = 0.15 Ks7pTAL1 = 0.786 Kx5pTAL = 0.67 NADPHoxidasek = 1.0 NQM1 = 0.02 R5Psinkk = 1.0 RKI1 = 0.05 RKIKeq = 4.0 RKIKiru5p = 9.88 RKIKr5p = 5.7 RKIKru5p = 2.47 RKIkcat = 335.0 RPE1 = 0.03 RPEKeq = 1.4 RPEKru5p = 5.97 RPEKx5p = 7.7 RPEkcat = 4020.0 SOL3 = 0.0296 SOLKg6l = 0.8 SOLKp6g = 0.5 SOLkcat = 4.3 TAL1 = 0.144 TALKe4pNQM1 = 0.305 TALKeq = 1.05 TALKf6pNQM1 = 1.04 TALKgapNQM1 = 0.272 TALKs7pNQM1 = 0.786 TALkcatNQM1 = 0.694 TKL1 = 0.455 TKLE4PKeq = 10.0 TKLE4Pkcat = 47.1 TKLR5PKeq = 1.2 TKLR5Pkcat = 40.5 ZWF1 = 0.02 ZWFKg6l = 0.01 ZWFKg6p = 0.042 ZWFKnadp = 0.045 ZWFKnadph = 0.017 ZWFkcat = 189.0 cell = 1.0 kcatGND1 = 28.0 kcatGND2 = 27.3 kcatTAL1 = 0.694 sumNADP = 0.33 default = 1.0 end parameters begin initial conditions E4P[0] = E4Pi G6L[0] = G6Li NADPH[0] = NADPHi P6G[0] = P6Gi R5P[0] = R5Pi Ru5P[0] = Ru5Pi S7P[0] = S7Pi X5P[0] = X5Pi end initial conditions begin initial values E4Pi = 0.029 G6Li = 0.1 NADPHi = 0.16 P6Gi = 0.25 R5Pi = 0.118 Ru5Pi = 0.033 S7Pi = 0.082 X5Pi = 0.041 end initial values begin assignment rules G6P := 0.9 NADP := sumNADP - NADPH[t] end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units