begin name
maher1
end name

begin reactions
v1 {148445.0}ornmat + {148445.0}cp = {148445.0}pi + {148445.0}citmat
v10 {40395.6}asR = {40395.6}fum + {40395.6}argR
v11 {40395.6}arg = {40395.6}ure + {40395.6}orn
v12 {40395.6}argR = {40395.6}ureR + {40395.6}orn
v13 {40395.6}argQ = {40395.6}ure + {40395.6}orn
v14 {509.861}argE = {509.861}ureE + {509.861}ornE
v15 {509.861}argRE = {509.861}ureRE + {509.861}ornE
v16 {509.861}argQE = {509.861}ureE + {509.861}ornE
v17 {40395.6}orn = {244266.0}ornims
v18 {244266.0}ornims = {148445.0}ornmat
v19 {509.861}$cppool = {509.861}cpeE
v2 {148445.0}ornmat + {148445.0}cpR = {148445.0}pi + {148445.0}citmatR
v20 {40395.6}cpe = {244266.0}cpims
v21 {244266.0}cpims = {148445.0}cp
v22 {40395.6}cpeR = {244266.0}cpimsR
v23 {244266.0}cpimsR = {148445.0}cpR
v24 {40395.6}$atppool = {40395.6}atp
v25 {40395.6}$asppool = {40395.6}asp
v26 {40395.6}ppi = {1.0}$XX
v27 {40395.6}fum = {1.0}$XX
v28 {148445.0}pi = {1.0}$XX
v29 {40395.6}amp = {1.0}$XX
v3 {148445.0}citmat = {244266.0}citims
v30 {40395.6}ure = {1.0}$XX
v31 {40395.6}ureR = {1.0}$XX
v32 {40395.6}cit = {509.861}citE
v33 {40395.6}citR = {509.861}citRE
v34 {40395.6}atp = {509.861}atpE
v35 {40395.6}asp = {509.861}aspE
v36 {40395.6}amp = {509.861}ampE
v37 {40395.6}ppi = {509.861}ppiE
v38 {40395.6}as = {509.861}asE
v39 {40395.6}asR = {509.861}asRE
v4 {148445.0}citmatR = {244266.0}citimsR
v40 {40395.6}fum = {509.861}fumE
v41 {40395.6}argQ = {509.861}argQE
v42 {40395.6}arg = {509.861}argE
v43 {40395.6}argR = {509.861}argRE
v44 {40395.6}ure = {509.861}ureE
v45 {40395.6}ureR = {509.861}ureRE
v46 {40395.6}orn = {509.861}ornE
v47 {40395.6}cpe = {509.861}cpeE
v48 {40395.6}cpeR = {509.861}cpeRE
v5 {244266.0}citims = {40395.6}cit
v6 {244266.0}citimsR = {40395.6}citR
v7 {40395.6}cit + {40395.6}atp + {40395.6}asp = {40395.6}ppi + {40395.6}as + {40395.6}amp
v8 {40395.6}citR + {40395.6}atp + {40395.6}asp = {40395.6}ppi + {40395.6}asR + {40395.6}amp
v9 {40395.6}as = {40395.6}fum + {40395.6}arg
end reactions

begin rate equations
v1 = (e10*k1e1*k3e1*k5e1*k7e1*matV*otcAdj*cp[t]*ornmat[t])/(k2e1*(k4e1 + k5e1)*k7e1 + k2e1*k4e1*k6e1*(citmat[t] + citmatR[t]) + k1e1*(k4e1 + k5e1)*k7e1*(cp[t] + cpR[t]) + k1e1*k4e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t]) + k3e1*k5e1*k7e1*ornmat[t] + k1e1*k3e1*(k5e1 + k7e1)*(cp[t] + cpR[t])*ornmat[t] + k1e1*k3e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t])*ornmat[t] + k2e1*(k4e1 + k5e1)*k8e1*pi[t] + (k2e1 + k4e1)*k6e1*k8e1*(citmat[t] + citmatR[t])*pi[t] + k3e1*k5e1*k8e1*ornmat[t]*pi[t] + k3e1*k6e1*k8e1*(citmat[t] + citmatR[t])*ornmat[t]*pi[t]) - (e10*k2e1*k4e1*k6e1*k8e1*matV*otcAdj*citmat[t]*pi[t])/(k2e1*(k4e1 + k5e1)*k7e1 + k2e1*k4e1*k6e1*(citmat[t] + citmatR[t]) + k1e1*(k4e1 + k5e1)*k7e1*(cp[t] + cpR[t]) + k1e1*k4e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t]) + k3e1*k5e1*k7e1*ornmat[t] + k1e1*k3e1*(k5e1 + k7e1)*(cp[t] + cpR[t])*ornmat[t] + k1e1*k3e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t])*ornmat[t] + k2e1*(k4e1 + k5e1)*k8e1*pi[t] + (k2e1 + k4e1)*k6e1*k8e1*(citmat[t] + citmatR[t])*pi[t] + k3e1*k5e1*k8e1*ornmat[t]*pi[t] + k3e1*k6e1*k8e1*(citmat[t] + citmatR[t])*ornmat[t]*pi[t])
v10 = (aslAdj*cytV*e30*k1e3*k3e3*k5e3*asR[t])/((k2e3 + k3e3)*k5e3 + (k2e3 + k3e3)*k6e3*(arg[t] + fm*argQ[t] + argR[t]) + k1e3*(k3e3 + k5e3)*(as[t] + asR[t]) + k2e3*k4e3*fum[t] + k4e3*k6e3*(arg[t] + fm*argQ[t] + argR[t])*fum[t] + k1e3*k4e3*(fm*argQ[t] + as[t] + asR[t])*fum[t]) - (aslAdj*cytV*e30*k2e3*k4e3*k6e3*argR[t]*fum[t])/((k2e3 + k3e3)*k5e3 + (k2e3 + k3e3)*k6e3*(arg[t] + fm*argQ[t] + argR[t]) + k1e3*(k3e3 + k5e3)*(as[t] + asR[t]) + k2e3*k4e3*fum[t] + k4e3*k6e3*(arg[t] + fm*argQ[t] + argR[t])*fum[t] + k1e3*k4e3*(fm*argQ[t] + as[t] + asR[t])*fum[t])
v11 = (argfac*cytV*e40*k1e4*k3e4*k4e4*arg[t])/((k2e4 + k3e4)*k4e4 + k1e4*(k3e4 + k4e4)*(arg[t] + fm*argQ[t] + argR[t]) + (k2e4 + k3e4)*k5e4*orn[t])
v12 = (argfac*cytV*e40*k1e4*k3e4*k4e4*argR[t])/((k2e4 + k3e4)*k4e4 + k1e4*(k3e4 + k4e4)*(arg[t] + fm*argQ[t] + argR[t]) + (k2e4 + k3e4)*k5e4*orn[t])
v13 = (argfac*cytV*e40*fm*k1e4*k3e4*k4e4*argQ[t])/((k2e4 + k3e4)*k4e4 + k1e4*(k3e4 + k4e4)*(arg[t] + fm*argQ[t] + argR[t]) + (k2e4 + k3e4)*k5e4*orn[t])
v14 = (argfac*e40E*eV*k1e4*k3e4*k4e4*argE[t])/((k2e4 + k3e4)*k4e4 + k1e4*(k3e4 + k4e4)*(argE[t] + fmE*argQE[t] + argRE[t]) + (k2e4 + k3e4)*k5e4*ornE[t])
v15 = (argfac*e40E*eV*k1e4*k3e4*k4e4*argRE[t])/((k2e4 + k3e4)*k4e4 + k1e4*(k3e4 + k4e4)*(argE[t] + fmE*argQE[t] + argRE[t]) + (k2e4 + k3e4)*k5e4*ornE[t])
v16 = (argfac*e40E*eV*fm*k1e4*k3e4*k4e4*argQE[t])/((k2e4 + k3e4)*k4e4 + k1e4*(k3e4 + k4e4)*(argE[t] + fmE*argQE[t] + argRE[t]) + (k2e4 + k3e4)*k5e4*ornE[t])
v17 = cytV*kornci*orn[t] - imsV*kornic*ornims[t]
v18 = imsV*kornim*ornims[t] - kornmi*matV*ornmat[t]
v19 = cppool*eV*kcp
v2 = (e10*k1e1*k3e1*k5e1*k7e1*matV*otcAdj*cpR[t]*ornmat[t])/(k2e1*(k4e1 + k5e1)*k7e1 + k2e1*k4e1*k6e1*(citmat[t] + citmatR[t]) + k1e1*(k4e1 + k5e1)*k7e1*(cp[t] + cpR[t]) + k1e1*k4e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t]) + k3e1*k5e1*k7e1*ornmat[t] + k1e1*k3e1*(k5e1 + k7e1)*(cp[t] + cpR[t])*ornmat[t] + k1e1*k3e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t])*ornmat[t] + k2e1*(k4e1 + k5e1)*k8e1*pi[t] + (k2e1 + k4e1)*k6e1*k8e1*(citmat[t] + citmatR[t])*pi[t] + k3e1*k5e1*k8e1*ornmat[t]*pi[t] + k3e1*k6e1*k8e1*(citmat[t] + citmatR[t])*ornmat[t]*pi[t]) - (e10*k2e1*k4e1*k6e1*k8e1*matV*otcAdj*citmatR[t]*pi[t])/(k2e1*(k4e1 + k5e1)*k7e1 + k2e1*k4e1*k6e1*(citmat[t] + citmatR[t]) + k1e1*(k4e1 + k5e1)*k7e1*(cp[t] + cpR[t]) + k1e1*k4e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t]) + k3e1*k5e1*k7e1*ornmat[t] + k1e1*k3e1*(k5e1 + k7e1)*(cp[t] + cpR[t])*ornmat[t] + k1e1*k3e1*k6e1*(citmat[t] + citmatR[t])*(cp[t] + cpR[t])*ornmat[t] + k2e1*(k4e1 + k5e1)*k8e1*pi[t] + (k2e1 + k4e1)*k6e1*k8e1*(citmat[t] + citmatR[t])*pi[t] + k3e1*k5e1*k8e1*ornmat[t]*pi[t] + k3e1*k6e1*k8e1*(citmat[t] + citmatR[t])*ornmat[t]*pi[t])
v20 = cytV*kcpei*cpe[t] - imsV*kcpie*cpims[t]
v21 = -(kcpmi*matV*cp[t]) + imsV*kcpim*cpims[t]
v22 = cytV*kcpei*cpeR[t] - imsV*kcpie*cpimsR[t]
v23 = imsV*kcpim*cpimsR[t] - kcpmi*matV*cpR[t]
v24 = atppool*cytV*katp
v25 = asppool*cytV*kasp
v26 = cytV*kppi*ppi[t]
v27 = cytV*kfum*fum[t]
v28 = kpi*matV*pi[t]
v29 = cytV*kamp*amp[t]
v3 = -(imsV*kcitim*citims[t]) + kcitmi*matV*citmat[t]
v30 = cytV*kure*ure[t]
v31 = 0
v32 = cytV*kcitCE*cit[t] - eV*kcitCEREV*citE[t]
v33 = cytV*kcitRCE*citR[t] - eV*kcitRCEREV*citRE[t]
v34 = cytV*katpCE*atp[t] - eV*katpCEREV*atpE[t]
v35 = cytV*kaspCE*asp[t] - eV*kaspCEREV*aspE[t]
v36 = cytV*kampCE*amp[t] - eV*kampCEREV*ampE[t]
v37 = cytV*kppiCE*ppi[t] - eV*kppiCEREV*ppiE[t]
v38 = cytV*kasCE*as[t] - eV*kasCEREV*asE[t]
v39 = cytV*kasRCE*asR[t] - eV*kasRCEREV*asRE[t]
v4 = -(imsV*kcitim*citimsR[t]) + kcitmi*matV*citmatR[t]
v40 = cytV*kfumCE*fum[t] - eV*kfumCEREV*fumE[t]
v41 = cytV*kargQCE*argQ[t] - eV*kargQCEREV*argQE[t]
v42 = cytV*kargCE*arg[t] - eV*kargCEREV*argE[t]
v43 = cytV*kargRCE*argR[t] - eV*kargRCEREV*argRE[t]
v44 = cytV*kureCE*ure[t] - eV*kureCEREV*ureE[t]
v45 = cytV*kureRCE*ureR[t] - eV*kureRCEREV*ureRE[t]
v46 = cytV*kornCE*orn[t] - eV*kornCEREV*ornE[t]
v47 = cytV*kcpeCE*cpe[t] - eV*kcpeCEREV*cpeE[t]
v48 = cytV*kcpeRCE*cpeR[t] - eV*kcpeRCEREV*cpeRE[t]
v5 = -(cytV*kcitci*cit[t]) + imsV*kcitic*citims[t]
v6 = imsV*kcitic*citimsR[t] - cytV*kcitci*citR[t]
v7 = (assAdj*cytV*e20*k11e2*k1e2*k3e2*k5e2*k7e2*k9e2*asp[t]*atp[t]*cit[t])/((1 + (arg[t] + argQ[t] + argR[t])/Kiarg)*(k11e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2 + k11e2*k2e2*k5e2*k7e2*k9e2*asp[t] + k12e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k4e2*(k6e2 + k7e2)*amp[t]*(as[t] + asR[t]) + k12e2*k2e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t]) + k11e2*k3e2*k5e2*k7e2*k9e2*asp[t]*atp[t] + k12e2*k3e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t])*atp[t] + k10e2*k12e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t] + k11e2*k1e2*k4e2*(k6e2 + k7e2)*k9e2*(cit[t] + citR[t]) + k11e2*k1e2*k5e2*k7e2*k9e2*asp[t]*(cit[t] + citR[t]) + k11e2*k1e2*k3e2*(k6e2 + k7e2)*k9e2*atp[t]*(cit[t] + citR[t]) + k1e2*k3e2*k5e2*(k11e2*k7e2 + k11e2*k9e2 + k7e2*k9e2)*asp[t]*atp[t]*(cit[t] + citR[t]) + k10e2*k1e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t]) + k11e2*k2e2*k4e2*k6e2*k8e2*ppi[t] + k10e2*k2e2*k4e2*k6e2*k8e2*amp[t]*ppi[t] + k12e2*k2e2*k4e2*k6e2*k8e2*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*(k2e2*k4e2 + k2e2*k6e2 + k4e2*k6e2)*k8e2*amp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k2e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k3e2*k6e2*k8e2*amp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k10e2*k12e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k11e2*k1e2*k4e2*k6e2*k8e2*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k4e2*k6e2*k8e2*amp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k6e2*k8e2*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k6e2*k8e2*amp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k5e2*k8e2*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t])) - (assAdj*cytV*e20*k10e2*k12e2*k2e2*k4e2*k6e2*k8e2*amp[t]*as[t]*ppi[t])/((1 + (arg[t] + argQ[t] + argR[t])/Kiarg)*(k11e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2 + k11e2*k2e2*k5e2*k7e2*k9e2*asp[t] + k12e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k4e2*(k6e2 + k7e2)*amp[t]*(as[t] + asR[t]) + k12e2*k2e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t]) + k11e2*k3e2*k5e2*k7e2*k9e2*asp[t]*atp[t] + k12e2*k3e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t])*atp[t] + k10e2*k12e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t] + k11e2*k1e2*k4e2*(k6e2 + k7e2)*k9e2*(cit[t] + citR[t]) + k11e2*k1e2*k5e2*k7e2*k9e2*asp[t]*(cit[t] + citR[t]) + k11e2*k1e2*k3e2*(k6e2 + k7e2)*k9e2*atp[t]*(cit[t] + citR[t]) + k1e2*k3e2*k5e2*(k11e2*k7e2 + k11e2*k9e2 + k7e2*k9e2)*asp[t]*atp[t]*(cit[t] + citR[t]) + k10e2*k1e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t]) + k11e2*k2e2*k4e2*k6e2*k8e2*ppi[t] + k10e2*k2e2*k4e2*k6e2*k8e2*amp[t]*ppi[t] + k12e2*k2e2*k4e2*k6e2*k8e2*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*(k2e2*k4e2 + k2e2*k6e2 + k4e2*k6e2)*k8e2*amp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k2e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k3e2*k6e2*k8e2*amp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k10e2*k12e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k11e2*k1e2*k4e2*k6e2*k8e2*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k4e2*k6e2*k8e2*amp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k6e2*k8e2*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k6e2*k8e2*amp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k5e2*k8e2*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t]))
v8 = (assAdj*cytV*e20*k11e2*k1e2*k3e2*k5e2*k7e2*k9e2*asp[t]*atp[t]*citR[t])/((1 + (arg[t] + argQ[t] + argR[t])/Kiarg)*(k11e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2 + k11e2*k2e2*k5e2*k7e2*k9e2*asp[t] + k12e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k4e2*(k6e2 + k7e2)*amp[t]*(as[t] + asR[t]) + k12e2*k2e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t]) + k11e2*k3e2*k5e2*k7e2*k9e2*asp[t]*atp[t] + k12e2*k3e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t])*atp[t] + k10e2*k12e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t] + k11e2*k1e2*k4e2*(k6e2 + k7e2)*k9e2*(cit[t] + citR[t]) + k11e2*k1e2*k5e2*k7e2*k9e2*asp[t]*(cit[t] + citR[t]) + k11e2*k1e2*k3e2*(k6e2 + k7e2)*k9e2*atp[t]*(cit[t] + citR[t]) + k1e2*k3e2*k5e2*(k11e2*k7e2 + k11e2*k9e2 + k7e2*k9e2)*asp[t]*atp[t]*(cit[t] + citR[t]) + k10e2*k1e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t]) + k11e2*k2e2*k4e2*k6e2*k8e2*ppi[t] + k10e2*k2e2*k4e2*k6e2*k8e2*amp[t]*ppi[t] + k12e2*k2e2*k4e2*k6e2*k8e2*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*(k2e2*k4e2 + k2e2*k6e2 + k4e2*k6e2)*k8e2*amp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k2e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k3e2*k6e2*k8e2*amp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k10e2*k12e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k11e2*k1e2*k4e2*k6e2*k8e2*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k4e2*k6e2*k8e2*amp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k6e2*k8e2*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k6e2*k8e2*amp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k5e2*k8e2*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t])) - (assAdj*cytV*e20*k10e2*k12e2*k2e2*k4e2*k6e2*k8e2*amp[t]*asR[t]*ppi[t])/((1 + (arg[t] + argQ[t] + argR[t])/Kiarg)*(k11e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2 + k11e2*k2e2*k5e2*k7e2*k9e2*asp[t] + k12e2*k2e2*k4e2*(k6e2 + k7e2)*k9e2*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k4e2*(k6e2 + k7e2)*amp[t]*(as[t] + asR[t]) + k12e2*k2e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t]) + k10e2*k12e2*k2e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t]) + k11e2*k3e2*k5e2*k7e2*k9e2*asp[t]*atp[t] + k12e2*k3e2*k5e2*k7e2*k9e2*asp[t]*(as[t] + asR[t])*atp[t] + k10e2*k12e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t] + k11e2*k1e2*k4e2*(k6e2 + k7e2)*k9e2*(cit[t] + citR[t]) + k11e2*k1e2*k5e2*k7e2*k9e2*asp[t]*(cit[t] + citR[t]) + k11e2*k1e2*k3e2*(k6e2 + k7e2)*k9e2*atp[t]*(cit[t] + citR[t]) + k1e2*k3e2*k5e2*(k11e2*k7e2 + k11e2*k9e2 + k7e2*k9e2)*asp[t]*atp[t]*(cit[t] + citR[t]) + k10e2*k1e2*k3e2*k5e2*k7e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t]) + k11e2*k2e2*k4e2*k6e2*k8e2*ppi[t] + k10e2*k2e2*k4e2*k6e2*k8e2*amp[t]*ppi[t] + k12e2*k2e2*k4e2*k6e2*k8e2*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*(k2e2*k4e2 + k2e2*k6e2 + k4e2*k6e2)*k8e2*amp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k2e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*ppi[t] + k10e2*k12e2*k3e2*k6e2*k8e2*amp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k10e2*k12e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*(as[t] + asR[t])*atp[t]*ppi[t] + k11e2*k1e2*k4e2*k6e2*k8e2*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k4e2*k6e2*k8e2*amp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k6e2*k8e2*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k6e2*k8e2*amp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k11e2*k1e2*k3e2*k5e2*k8e2*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t] + k10e2*k1e2*k3e2*k5e2*k8e2*amp[t]*asp[t]*atp[t]*(cit[t] + citR[t])*ppi[t]))
v9 = (aslAdj*cytV*e30*k1e3*k3e3*k5e3*as[t])/((k2e3 + k3e3)*k5e3 + (k2e3 + k3e3)*k6e3*(arg[t] + fm*argQ[t] + argR[t]) + k1e3*(k3e3 + k5e3)*(as[t] + asR[t]) + k2e3*k4e3*fum[t] + k4e3*k6e3*(arg[t] + fm*argQ[t] + argR[t])*fum[t] + k1e3*k4e3*(fm*argQ[t] + as[t] + asR[t])*fum[t]) - (aslAdj*cytV*e30*k2e3*k4e3*k6e3*arg[t]*fum[t])/((k2e3 + k3e3)*k5e3 + (k2e3 + k3e3)*k6e3*(arg[t] + fm*argQ[t] + argR[t]) + k1e3*(k3e3 + k5e3)*(as[t] + asR[t]) + k2e3*k4e3*fum[t] + k4e3*k6e3*(arg[t] + fm*argQ[t] + argR[t])*fum[t] + k1e3*k4e3*(fm*argQ[t] + as[t] + asR[t])*fum[t])
end rate equations

begin parameters
Kiarg = 0.0007
ampfinal = "5e-05"
argfac = 1.0
aslAdj = 1.0
assAdj = 2.0
cellV = "3.868e-05"
cytV = "2.47552e-05"
e10 = "1.49288e-05"
e20 = "6.25e-06"
e30 = "3.4375e-06"
e40 = "1.20984e-05"
e40E = "2.28177e-08"
eV = 0.00196132
fm = 1.0
fmE = 1.0
fumfinal = "1e-05"
imsV = "4.09389e-06"
k10e2 = 640000.0
k11e2 = 50.0
k12e2 = 170000.0
k1e1 = 17000000.0
k1e2 = 240000.0
k1e3 = 2700000.0
k1e4 = 10000000.0
k2e1 = 63.0
k2e2 = 2.3
k2e3 = 70.0
k2e4 = 54000.0
k3e1 = 2100000.0
k3e2 = 350000.0
k3e3 = 75.0
k3e4 = 5300.0
k4e1 = 1000.0
k4e2 = 10.0
k4e3 = 1500000.0
k4e4 = 30000.0
k5e1 = 3000.0
k5e2 = 480000.0
k5e3 = 1100.0
k5e4 = 10000000.0
k6e1 = 90000.0
k6e2 = 10.0
k6e3 = 700000.0
k7e1 = 2600.0
k7e2 = 20.0
k8e1 = 500000.0
k8e2 = 890000.0
k9e2 = 50.0
kamp = 0.00630208
kampCE = 10000000.0
kampCEREV = 126217.0
kargCE = 10000000.0
kargCEREV = 126217.0
kargQCE = 10000000.0
kargQCEREV = 126217.0
kargRCE = 10000000.0
kargRCEREV = 126217.0
kasCE = 10000000.0
kasCEREV = 126217.0
kasRCE = 10000000.0
kasRCEREV = 126217.0
kasp = 0.000315104
kaspCE = 10000000.0
kaspCEREV = 126217.0
katp = 0.000157552
katpCE = 10000000.0
katpCEREV = 126217.0
kcitCE = 10000000.0
kcitCEREV = 126217.0
kcitRCE = 10000000.0
kcitRCEREV = 126217.0
kcitci = 10000.0
kcitic = 60468.6
kcitim = 100.0
kcitmi = 60.7717
kcp = "2.65143e-07"
kcpeCE = 10000000.0
kcpeCEREV = 126217.0
kcpeRCE = 10000000.0
kcpeRCEREV = 126217.0
kcpei = 10000.0
kcpie = 60468.6
kcpim = 0.822751
kcpmi = 0.5
kfum = 0.0315104
kfumCE = 10000000.0
kfumCEREV = 126217.0
kornCE = 10000000.0
kornCEREV = 126217.0
kornci = 10000.0
kornic = 60468.6
kornim = 110.0
kornmi = 66.8489
kpi = 0.0231588
kppi = 0.0315104
kppiCE = 10000000.0
kppiCEREV = 126217.0
kure = 0.315104
kureCE = 10000000.0
kureCEREV = 126217.0
kureRCE = 10000000.0
kureRCEREV = 126217.0
matV = "6.73651e-06"
mitoV = "1.08304e-05"
nucV = "3.0944e-06"
otcAdj = 1.0
pifinal = "5e-05"
ppifinal = "1e-05"
sampleV = 0.002
steadyStateUreaProdn = "7.80047e-12"
urefinal = "1e-06"
XX = 0.0
asppool = 0.001
atppool = 0.002
cppool = 0.015
default = 1.0
end parameters

begin initial conditions
amp[0] = ampi
ampE[0] = ampEi
arg[0] = argi
argE[0] = argEi
argQ[0] = argQi
argQE[0] = argQEi
argR[0] = argRi
argRE[0] = argREi
as[0] = asi
asE[0] = asEi
asR[0] = asRi
asRE[0] = asREi
asp[0] = aspi
aspE[0] = aspEi
atp[0] = atpi
atpE[0] = atpEi
cit[0] = citi
citE[0] = citEi
citR[0] = citRi
citRE[0] = citREi
citims[0] = citimsi
citimsR[0] = citimsRi
citmat[0] = citmati
citmatR[0] = citmatRi
cp[0] = cpi
cpR[0] = cpRi
cpe[0] = cpei
cpeE[0] = cpeEi
cpeR[0] = cpeRi
cpeRE[0] = cpeREi
cpims[0] = cpimsi
cpimsR[0] = cpimsRi
fum[0] = fumi
fumE[0] = fumEi
orn[0] = orni
ornE[0] = ornEi
ornims[0] = ornimsi
ornmat[0] = ornmati
pi[0] = pii
ppi[0] = ppii
ppiE[0] = ppiEi
ure[0] = urei
ureE[0] = ureEi
ureR[0] = ureRi
ureRE[0] = ureREi
end initial conditions

begin initial values
ampi = 1e-06
ampEi = 1e-06
argi = 1e-06
argEi = 1e-06
argQi = 0.0
argQEi = 0.0
argRi = 0.0
argREi = 0.0
asi = 1e-06
asEi = 1e-06
asRi = 0.0
asREi = 0.0
aspi = 0.0001
aspEi = 0.0001
atpi = 0.0015
atpEi = 0.0015
citi = 1e-06
citEi = 1e-06
citRi = 0.0
citREi = 0.0
citimsi = 1e-06
citimsRi = 0.0
citmati = 1e-06
citmatRi = 0.0
cpi = 1e-05
cpRi = 0.0
cpei = 1e-05
cpeEi = 0.0005
cpeRi = 0.0
cpeREi = 2.26667e-06
cpimsi = 1e-05
cpimsRi = 0.0
fumi = 1e-06
fumEi = 1e-06
orni = 0.0002
ornEi = 0.0002
ornimsi = 0.00045
ornmati = 1e-06
pii = 0.0001
ppii = 1e-06
ppiEi = 1e-06
urei = 1e-06
ureEi = 1e-06
ureRi = 0.0
ureREi = 0.0
end initial values

begin assignment rules
end assignment rules

begin function definitions
end function definitions

begin events
end events

begin process annotations
end process annotations

begin species annotations
end species annotations

begin units
end units