begin name levchenko1 end name begin reactions Reaction1 {1.0}RAF + {1.0}RAFK = {1.0}RAFRAFK Reaction10 {1.0}MEKp + {1.0}MEKPH = {1.0}MEKpMEKPH Reaction11 {1.0}MEKpMEKPH = {1.0}MEKp + {1.0}MEKPH Reaction12 {1.0}MEKpMEKPH = {1.0}MEK + {1.0}MEKPH Reaction13 {1.0}MEKp + {1.0}RAFp = {1.0}MEKpRAFp Reaction14 {1.0}MEKpRAFp = {1.0}MEKp + {1.0}RAFp Reaction15 {1.0}MEKpRAFp = {1.0}MEKpp + {1.0}RAFp Reaction16 {1.0}MEKPH + {1.0}MEKpp = {1.0}MEKppMEKPH Reaction17 {1.0}MEKppMEKPH = {1.0}MEKPH + {1.0}MEKpp Reaction18 {1.0}MEKppMEKPH = {1.0}MEKp + {1.0}MEKPH Reaction19 {1.0}MAPK + {1.0}MEKpp = {1.0}MAPKMEKpp Reaction2 {1.0}RAFRAFK = {1.0}RAF + {1.0}RAFK Reaction20 {1.0}MAPKMEKpp = {1.0}MAPK + {1.0}MEKpp Reaction21 {1.0}MAPKMEKpp = {1.0}MAPKp + {1.0}MEKpp Reaction22 {1.0}MAPKp + {1.0}MAPKPH = {1.0}MAPKpMAPKPH Reaction23 {1.0}MAPKpMAPKPH = {1.0}MAPKp + {1.0}MAPKPH Reaction24 {1.0}MAPKpMAPKPH = {1.0}MAPK + {1.0}MAPKPH Reaction25 {1.0}MAPKp + {1.0}MEKpp = {1.0}MAPKpMEKpp Reaction26 {1.0}MAPKpMEKpp = {1.0}MAPKp + {1.0}MEKpp Reaction27 {1.0}MAPKpMEKpp = {1.0}MAPKpp + {1.0}MEKpp Reaction28 {1.0}MAPKPH + {1.0}MAPKpp = {1.0}MAPKppMAPKPH Reaction29 {1.0}MAPKppMAPKPH = {1.0}MAPKPH + {1.0}MAPKpp Reaction3 {1.0}RAFRAFK = {1.0}RAFK + {1.0}RAFp Reaction30 {1.0}MAPKppMAPKPH = {1.0}MAPKp + {1.0}MAPKPH Reaction4 {1.0}RAFp + {1.0}RAFPH = {1.0}RAFpRAFPH Reaction5 {1.0}RAFpRAFPH = {1.0}RAFp + {1.0}RAFPH Reaction6 {1.0}RAFpRAFPH = {1.0}RAF + {1.0}RAFPH Reaction7 {1.0}MEK + {1.0}RAFp = {1.0}MEKRAFp Reaction8 {1.0}MEKRAFp = {1.0}MEK + {1.0}RAFp Reaction9 {1.0}MEKRAFp = {1.0}MEKp + {1.0}RAFp end reactions begin rate equations Reaction1 = Reaction1a1*RAF[t]*RAFK[t] Reaction10 = Reaction10a4*MEKp[t]*MEKPH[t] Reaction11 = Reaction11d4*MEKpMEKPH[t] Reaction12 = Reaction12k4*MEKpMEKPH[t] Reaction13 = Reaction13a5*MEKp[t]*RAFp[t] Reaction14 = Reaction14d5*MEKpRAFp[t] Reaction15 = Reaction15k5*MEKpRAFp[t] Reaction16 = Reaction16a6*MEKPH[t]*MEKpp[t] Reaction17 = Reaction17d6*MEKppMEKPH[t] Reaction18 = Reaction18k6*MEKppMEKPH[t] Reaction19 = Reaction19a7*MAPK[t]*MEKpp[t] Reaction2 = Reaction2d1*RAFRAFK[t] Reaction20 = Reaction20d7*MAPKMEKpp[t] Reaction21 = Reaction21k7*MAPKMEKpp[t] Reaction22 = Reaction22a8*MAPKp[t]*MAPKPH[t] Reaction23 = Reaction23d8*MAPKpMAPKPH[t] Reaction24 = Reaction24k8*MAPKpMAPKPH[t] Reaction25 = Reaction25a9*MAPKp[t]*MEKpp[t] Reaction26 = Reaction26d9*MAPKpMEKpp[t] Reaction27 = Reaction27k9*MAPKpMEKpp[t] Reaction28 = Reaction28a10*MAPKPH[t]*MAPKpp[t] Reaction29 = Reaction29d10*MAPKppMAPKPH[t] Reaction3 = Reaction3k1*RAFRAFK[t] Reaction30 = Reaction30k10*MAPKppMAPKPH[t] Reaction4 = Reaction4a2*RAFp[t]*RAFPH[t] Reaction5 = Reaction5d2*RAFpRAFPH[t] Reaction6 = Reaction6k2*RAFpRAFPH[t] Reaction7 = Reaction7a3*MEK[t]*RAFp[t] Reaction8 = Reaction8d3*MEKRAFp[t] Reaction9 = Reaction9k3*MEKRAFp[t] end rate equations begin parameters Reaction1a1 = 1.0 Reaction2d1 = 0.4 Reaction3k1 = 0.1 Reaction4a2 = 0.5 Reaction5d2 = 0.5 Reaction6k2 = 0.1 Reaction7a3 = 3.3 Reaction8d3 = 0.42 Reaction9k3 = 0.1 Reaction10a4 = 10.0 Reaction11d4 = 0.8 Reaction12k4 = 0.1 Reaction13a5 = 3.3 Reaction14d5 = 0.4 Reaction15k5 = 0.1 Reaction16a6 = 10.0 Reaction17d6 = 0.8 Reaction18k6 = 0.1 Reaction19a7 = 20.0 Reaction20d7 = 0.6 Reaction21k7 = 0.1 Reaction22a8 = 5.0 Reaction23d8 = 0.4 Reaction24k8 = 0.1 Reaction25a9 = 20.0 Reaction26d9 = 0.6 Reaction27k9 = 0.1 Reaction28a10 = 5.0 Reaction29d10 = 0.4 Reaction30k10 = 0.1 Cytoplasm = 1.0 end parameters begin initial conditions MAPK[0] = MAPKi MAPKMEKpp[0] = MAPKMEKppi MAPKPH[0] = MAPKPHi MAPKp[0] = MAPKpi MAPKpMAPKPH[0] = MAPKpMAPKPHi MAPKpMEKpp[0] = MAPKpMEKppi MAPKpp[0] = MAPKppi MAPKppMAPKPH[0] = MAPKppMAPKPHi MEK[0] = MEKi MEKPH[0] = MEKPHi MEKRAFp[0] = MEKRAFpi MEKp[0] = MEKpi MEKpMEKPH[0] = MEKpMEKPHi MEKpRAFp[0] = MEKpRAFpi MEKpp[0] = MEKppi MEKppMEKPH[0] = MEKppMEKPHi RAF[0] = RAFi RAFK[0] = RAFKi RAFPH[0] = RAFPHi RAFRAFK[0] = RAFRAFKi RAFp[0] = RAFpi RAFpRAFPH[0] = RAFpRAFPHi end initial conditions begin initial values MAPKi = 0.4 MAPKMEKppi = 0.0 MAPKPHi = 0.3 MAPKpi = 0.0 MAPKpMAPKPHi = 0.0 MAPKpMEKppi = 0.0 MAPKppi = 0.0 MAPKppMAPKPHi = 0.0 MEKi = 0.2 MEKPHi = 0.2 MEKRAFpi = 0.0 MEKpi = 0.0 MEKpMEKPHi = 0.0 MEKpRAFpi = 0.0 MEKppi = 0.0 MEKppMEKPHi = 0.0 RAFi = 0.3 RAFKi = 0.2 RAFPHi = 0.3 RAFRAFKi = 0.0 RAFpi = 0.0 RAFpRAFPHi = 0.0 end initial values begin assignment rules end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations MAPKPH http://identifiers.org/uniprot/Q90W58 end species annotations begin units end units