begin name kouril8 end name begin reactions v1 {1.0}ATP + {1.0}P3G = {1.0}ADP + {1.0}BPG v2 {1.0}ADP + {1.0}pep = {1.0}ATP + {1.0}pyr v3 {1.0}BPG = {1.0}$pi + {1.0}P3G v4 {1.0}nadph + {1.0}BPG = {1.0}$pi + {1.0}nadp + {1.0}gap v5 {1.0}nadp + {1.0}glc = {1.0}nadph + {1.0}$GA v6 {1.0}gap = {1.0}$sink end reactions begin rate equations v1 = (protPGK*(-((VmrPGK*ADP[t]*BPG[t])/(KpgkADP*KpgkBPG)) + (VmfPGK*ATP[t]*P3G[t])/(KpgkATP*KpgkP3G)))/((1 + ADP[t]/KiADP)*(1 + ((1 + ADP[t]/KpgkADP)*BPG[t])/KpgkBPG + ((1 + ATP[t]/KpgkATP)*P3G[t])/KpgkP3G)) v2 = kPK*ADP[t]*pep[t] v3 = kdbpg*BPG[t] v4 = (protGAPdh*(-((pi*Vmarev*gap[t]*nadp[t])/(Kgap*Knadp*Kpi)) + (Vmfor*BPG[t]*nadph[t])/(KBPG*Knadph)))/((BPG[t]/KBPG + (1 + pi/Kpi)*(1 + gap[t]/Kgap))*(1 + nadp[t]/Knadp + nadph[t]/Knadph)) v5 = kGDH*glc[t]*nadp[t] v6 = kdgap*gap[t] end rate equations begin parameters KBPG = 0.0895997307185501 Kgap = 3.09006 KiADP = 1.01661161972841 Knadp = 0.204381 Knadph = 0.092444 KpgkADP = 0.374683891073216 KpgkATP = 9.30939957007288 KpgkBPG = 0.00824346710166223 KpgkP3G = 0.567800672197298 Kpi = 112.39 Vmarev = 35.871 VmfPGK = 17.2125572084323 Vmfor = 23.3991 VmrPGK = 37.9602642543915 kGDH = 10.0 kPK = 50.0 kdbpg = 0.736416 kdgap = 0.0559 protGAPdh = 0.0421 protPGK = 0.0045 sink2 = 0.0 GA = 0.0 pi = 0.0 sink = 0.0 default = 1.0 end parameters begin initial conditions ADP[0] = ADPi ATP[0] = ATPi BPG[0] = BPGi P3G[0] = P3Gi gap[0] = gapi glc[0] = glci nadp[0] = nadpi nadph[0] = nadphi pep[0] = pepi pyr[0] = pyri end initial conditions begin initial values ADPi = 0.0 ATPi = 10.0 BPGi = 0.0 P3Gi = 3.0 gapi = 0.0 glci = 10.0 nadpi = 0.0 nadphi = 0.2 pepi = 5.0 pyri = 0.4 end initial values begin assignment rules end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units