begin name kim5 end name begin reactions reaction1 {1.0}species1 = {1.0}$EXTERNAL reaction2 {1.0}species2 = {1.0}$EXTERNAL reaction3 {1.0}species3 = {1.0}$EXTERNAL reaction4 {1.0}species4 = {1.0}$EXTERNAL reaction5 {1.0}species3 = {1.0}species3 + {1.0}species1 reaction6 {1.0}species4 = {1.0}species4 + {1.0}species2 reaction7 {1.0}species2 = {1.0}species2 + {1.0}species3 reaction8 {1.0}species1 = {1.0}species1 + {1.0}species4 reaction9 {1.0}species4 = {1.0}species4 + {1.0}species1 end reactions begin rate equations reaction1 = compartment1*reaction1k1*species1[t] reaction2 = compartment1*reaction2k1*species2[t] reaction3 = compartment1*reaction3k1*species3[t] reaction4 = compartment1*reaction4k1*species4[t] reaction5 = compartment1*parameter1*species3[t] reaction6 = compartment1*parameter2*species4[t] reaction7 = compartment1*function1[reaction7V, reaction7Shalve, parameter4, species2[t]] reaction8 = compartment1*function2[species1[t], reaction8Shalve, reaction8V, parameter5] reaction9 = compartment1*parameter6*species4[t] end rate equations begin parameters parameter1 = 0.57 parameter2 = 2.5 parameter3 = 1.0 parameter4 = 6.5 parameter5 = 6.5 parameter6 = 1.5 reaction1k1 = 1.0 reaction2k1 = 1.0 reaction3k1 = 1.0 reaction4k1 = 1.0 reaction7V = 1.0 reaction7Shalve = 1.0 reaction8Shalve = 1.0 reaction8V = 1.0 compartment1 = 1.0 end parameters begin initial conditions species1[0] = species1i species2[0] = species2i species3[0] = species3i species4[0] = species4i end initial conditions begin initial values species1i = 0.1 species2i = 0.1 species3i = 0.1 species4i = 0.1 end initial values begin assignment rules end assignment rules begin function definitions function1[V_,Shalve_,h_,substrate_] := V/(Shalve^h + substrate^h) function2[substrate_,Shalve_,V_,h_] := (substrate^h*V)/(Shalve^h + substrate^h) end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units