begin name kim4 end name begin reactions React1 {1.0}$EXTERNAL = {1.0}R1 React10 {1.0}R2 = {1.0}$EXTERNAL React11 {1.0}$EXTERNAL = {1.0}P2 React12 {1.0}P2 = {1.0}$EXTERNAL React13 {1.0}$EXTERNAL = {1.0}P2prime React14 {1.0}$EXTERNAL = {1.0}P2prime React15 {1.0}P2prime = {1.0}$EXTERNAL React16 {1.0}$EXTERNAL = {1.0}P3prime React17 {1.0}P3prime = {1.0}$EXTERNAL React18 {1.0}$EXTERNAL = {1.0}P2prime React19 {1.0}$EXTERNAL = {1.0}P4prime React2 {1.0}R1 = {1.0}$EXTERNAL React20 {1.0}P4prime = {1.0}$EXTERNAL React3 {1.0}$EXTERNAL = {1.0}P1 React4 {1.0}P1 = {1.0}$EXTERNAL React5 {1.0}$EXTERNAL = {1.0}P1prime React6 {1.0}$EXTERNAL = {1.0}P1prime React7 {1.0}$EXTERNAL = {1.0}P1prime React8 {1.0}P1prime = {1.0}$EXTERNAL React9 {1.0}$EXTERNAL = {1.0}R2 end reactions begin rate equations React1 = i1 React10 = dR2*R2[t] React11 = sP2R2*R2[t] React12 = dP2*P2[t] React13 = sP2primeP2*P2[t] React14 = s2/(1 + P1prime[t]^n) React15 = dP2prime*P2prime[t] React16 = (sP3primeP2prime*P2prime[t]^n)/(1 + P2prime[t]^n) React17 = dP3prime*P3prime[t] React18 = s3/(1 + P4prime[t]^n) React19 = (sP4primeP1prime*P1prime[t]^n)/(1 + P1prime[t]^n) React2 = dR1*R1[t] React20 = dP4prime*P4prime[t] React3 = sP1R1*R1[t] React4 = dP1*P1[t] React5 = sP1primeP1*P1[t] React6 = s1/(1 + P2prime[t]^n) React7 = s3/(1 + P3prime[t]^n) React8 = dP1prime*P1prime[t] React9 = i2 end rate equations begin parameters dP1 = 0.22367 dP1prime = 0.37048 dP2 = 0.22367 dP2prime = 0.37048 dP3prime = 0.37048 dP4prime = 0.37048 dR1 = 0.23521 dR2 = 0.23521 n = 9.0 s1 = 0.4 s2 = 0.3 s3 = 0.2 sP1R1 = 0.47305 sP1primeP1 = 0.28687 sP2R2 = 0.47305 sP2primeP2 = 0.28687 sP3primeP2prime = 0.5 sP4primeP1prime = 0.5 compartment = 1.0 end parameters begin initial conditions P1[0] = P1i P1prime[0] = P1primei P2[0] = P2i P2prime[0] = P2primei P3prime[0] = P3primei P4prime[0] = P4primei R1[0] = R1i R2[0] = R2i end initial conditions begin initial values P1i = 0.1 P1primei = 0.1 P2i = 1.0 P2primei = 1.0 P3primei = 0.1 P4primei = 0.1 R1i = 0.01 R2i = 0.1 end initial values begin assignment rules i1 := Piecewise[{{1, t >= 50 && t <= 100}}, 0] i2 := Piecewise[{{1, t >= 175 && t <= 225}}, 0] end assignment rules begin function definitions end function definitions begin events end events begin process annotations React11 http://identifiers.org/go/GO:0006412 React3 http://identifiers.org/go/GO:0006412 end process annotations begin species annotations R1 http://identifiers.org/chebi/CHEBI:33699 R1 http://identifiers.org/kegg.compound/C00046 R2 http://identifiers.org/chebi/CHEBI:33699 R2 http://identifiers.org/kegg.compound/C00046 end species annotations begin units end units