#ibrahim1 #reactions R1: {1.0}Mad1_CMad2 + {1.0}OMad2 = {1.0}Mad1_CMad2_OMad2 Cytoplasm * (u * k1f * Mad1_CMad2 * OMad2 - k1r * Mad1_CMad2_OMad2) R2: {1.0}Mad1_CMad2_OMad2 + {1.0}Cdc20 = {1.0}Mad1_CMad2 + {1.0}Cdc20_CMad2 u * k2f * Mad1_CMad2_OMad2 * Cytoplasm * Cdc20 R3: {1.0}Cdc20_CMad2 = {1.0}Cdc20 + {1.0}OMad2 k3f * Cdc20_CMad2 * Cytoplasm R4: {1.0}Cdc20_CMad2 + {1.0}Bub3_BubR1 = {1.0}MCC Cytoplasm * (u * k4f * Cdc20_CMad2 * Bub3_BubR1 - k4r * MCC) R5: {1.0}Bub3_BubR1 + {1.0}Cdc20 = {1.0}Bub3_BubR1_Cdc20 Cytoplasm * (u * k5f * Bub3_BubR1 * Cdc20 - k5r * Bub3_BubR1_Cdc20) R6: {1.0}OMad2 + {1.0}Cdc20 = {1.0}Cdc20_CMad2 kf6 * OMad2 * Cdc20 * Cytoplasm R7: {1.0}MCC + {1.0}APC = {1.0}MCC_APC u * k7f * MCC * APC * Cytoplasm R7a: {1.0}MCC_APC = {1.0}MCC + {1.0}APC u_prime * k7r * MCC_APC * Cytoplasm R8: {1.0}APC + {1.0}Cdc20 = {1.0}APC_Cdc20 Cytoplasm * (k8f * APC * Cdc20 - k8r * APC_Cdc20) #parameters const_val_0 = 0.0 const_val_1 = 1.0 k1f = 200000.0 k1r = 0.2 k2f = 100000000.0 k3f = 0.01 k4f = 10000000.0 k4r = 0.02 k5f = 10000.0 k5r = 0.2 k7f = 100000000.0 k7r = 0.08 k8f = 5000000.0 k8r = 0.08 kf6 = 1000.0 u = 1.0 u_prime = 0.0 Cytoplasm = 1.0 #initial values APC = 9e-08 APC_Cdc20 = 0.0 Bub3_BubR1 = 1.27e-07 Bub3_BubR1_Cdc20 = 0.0 Cdc20 = 2.2e-07 Cdc20_CMad2 = 0.0 MCC = 0.0 MCC_APC = 0.0 Mad1_CMad2 = 5e-08 Mad1_CMad2_OMad2 = 0.0 OMad2 = 1.3e-07 #assignment rules