begin name
arnold8
end name

begin reactions
ATPS {1.0}ADP + {1.0}Pi = {1.0}ATP
PGAred {1.0}PGA + {1.0}ATP = {1.0}ADP + {1.0}TP + {1.0}Pi
RuBPreg {1.0}Ru5P + {1.0}ATP = {1.0}RuBP + {1.0}ADP
RuBisCO {1.0}RuBP = {2.0}PGA
TPT {1.0}TP + {1.0}$Pic = {1.0}$TPc + {1.0}Pi
TPred {5.0}TP = {3.0}Ru5P + {2.0}Pi
end reactions

begin rate equations
ATPS = chloroplast*function10[V6, ADP[t], Pi[t], ATPSK1, ATPSK2]
PGAred = chloroplast*function6[PGAredVm, PGA[t], ATP[t], ADP[t], TP[t], Pi[t], PGAredk, PGAredK1, PGAredK2]
RuBPreg = chloroplast*function8[RuBPregVm, Ru5P[t], ATP[t], RuBPregK1, RuBPregK2, RuBPregK3, Pi[t]]
RuBisCO = chloroplast*function5[RuBisCOk, ERuBisCO, totRuBP, RuBisCOK]
TPT = function9[TP[t], Pic, TPc, Pi[t], TPTK2, TPTK1, TPTVm]
TPred = chloroplast*function7[TPredVm, TP[t], TPredK]
end rate equations

begin parameters
P0 = 16.0
V6 = 5.8801285588795
ERuBisCO = 3.56
Pic = 1.4
TPc = 0.2
RuBisCOk = 0.504
RuBisCOK = 0.04
PGAredVm = 3.49
PGAredk = 14.0
PGAredK1 = 1.0
PGAredK2 = 1.0
TPredVm = 1.06
TPredK = 0.4
RuBPregVm = 4.81
RuBPregK1 = 0.05
RuBPregK2 = 0.5
RuBPregK3 = 0.05
TPTK2 = 0.25
TPTK1 = 0.08
TPTVm = 3.3
ATPSK1 = 0.08
ATPSK2 = 0.5
chloroplast = 1.0
cytosol = 1.0
end parameters

begin initial conditions
ADP[0] = ADPi
ATP[0] = ATPi
PGA[0] = PGAi
Pi[0] = Pii
Ru5P[0] = Ru5Pi
RuBP[0] = RuBPi
TP[0] = TPi
end initial conditions

begin initial values
ADPi = 0.82
ATPi = 0.68
PGAi = 2.4
Pii = 5.0
Ru5Pi = 0.0500747384155456
RuBPi = 2.0
TPi = 0.5
end initial values

begin assignment rules
totRuBP := (P0 - ATP[t] - PGA[t] - Pi[t] - Ru5P[t] - TP[t])/2
end assignment rules

begin function definitions
function9[S1_,S2_,P1_,P2_,K2_,K1_,Vm_] := ((-(P1*P2) + S1*S2)*Vm)/(K2*(P1 + S1) + K1*(P2 + S2) + K1*K2*(P2/K2 + S1/K1)*(P1/K1 + S2/K2))
function10[Vm_,s1_,s2_,K1_,K2_] := (s1*s2*Vm)/((K1 + s1)*(K2 + s2))
function8[Vm_,S1_,S2_,K1_,K2_,K3_,R_] := (S1*S2*Vm)/(K1*K2 + K3*R + K2*S2 + S1*S2)
function7[Vm_,S_,K_] := (S*Vm)/(K + S)
function5[k_,E_,S_,K_] := (k*(E + K + S - Sqrt[-4*E*S + (E + K + S)^2]))/2
function6[Vm_,S1_,S2_,P1_,P2_,P3_,k_,K1_,K2_] := ((-((P1*P2*P3)/k) + S1*S2)*Vm)/(K1 + (P1*P2*P3)/k + (K1*S1*S2)/K2)
end function definitions

begin events
end events

begin process annotations
end process annotations

begin species annotations
ADP http://identifiers.org/chebi/CHEBI:16761
end species annotations

begin units
end units