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hoefnagel_mixedacid

hoefnagel mixedacid demo

Detail

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v_1

ATP = ADP + P

v_2

COA + PYR = ACCOA + H2CO2

v_3

ACAL + NADH = ETOH + NAD

v_4

O2 + NADH = NAD

v_5

P + ACCOA = COA + ACP

v_6

ADP + ACP = ATP + AC

v_7

NADH + PYR = LAC + NAD

v_8

ACCOA + NADH = ACAL + COA + NAD

v_9

GLC + {2.0}NAD + {2.0}ADP = {2.0}PYR + {2.0}NADH + {2.0}ATP

Parameters

Global parameters

KATP*

Keq10*

Keq11*

Keq13*

Keq14*

Keq2*

Keq5*

Keq9*

Ki10ACCOA*

Ki10ACP*

Ki10COA*

Ki10P*

Ki12*

Km10ACP*

Km10P*

Km11AC*

Km11ACP*

Km11ADP*

Km11ATP*

Km12ACCOA*

Km12COA*

Km12NAD*

Km12NADH*

Km12PYR*

Km13ACAL*

Km13ACCOA*

Km13COA*

Km13NAD*

Km13NADH*

Km14ACAL*

Km14ETOH*

Km14NAD*

Km14NADH*

Km1ADP*

Km1ATP*

Km1GLC*

Km1NAD*

Km1NADH*

Km1PYR*

Km2LAC*

Km2NAD*

Km2NADH*

Km2PYR*

Km4NAD*

Km4NADH*

Km4O*

Km5ACLAC*

Km5PYR*

Km6ACET*

Km6ACLAC*

Km7ACET*

Km9ACET*

Km9BUT*

Km9NAD*

Km9NADH*

Vmax1*

Vmax10*

Vmax11*

Vmax12*

Vmax13*

Vmax14*

Vmax2*

Vmax3*

Vmax4*

Vmax5*

Vmax6*

Vmax7*

Vmax9*

h5*

k8*

kpfl*

n3*

default_compartment*

Fixed species

Initial values

Functions and Rules

Events

Constraints

Note that constraints are not enforced in simulations. It remains the responsibility of the user to verify that simulation results satisfy these constraints.

Snap to grid*

Show wireframe*

Show modifiers*

Show compartments*

Gravity*

Repulsion*

Pool threshold*

Species:

Reactions:

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Shift-click: pool/unpool species
Right-click: context menu

Apply alternate model layout to overlapping elements in current model:

Model schema*

Parameter*

Start*

End*

Steps*

Species

Rates

Assignment rules

No manuscript information is available for this model.

No additional notes are available for this model.

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