nakakuki2010_Fig1

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Model Manuscripts

Ligand-specific c-Fos expression emerges from the spatiotemporal control of ErbB network dynamics.

  • Takashi Nakakuki
  • Marc R Birtwistle
  • Yuko Saeki
  • Noriko Yumoto
  • Kaori Ide
  • Takeshi Nagashima
  • Lutz Brusch
  • Babatunde A Ogunnaike
  • Mariko Okada-Hatakeyama
  • Boris N Kholodenko
Cell 2010; 141 (5): 884-896
Abstract
Activation of ErbB receptors by epidermal growth factor (EGF) or heregulin (HRG) determines distinct cell-fate decisions, although signals propagate through shared pathways. Using mathematical modeling and experimental approaches, we unravel how HRG and EGF generate distinct, all-or-none responses of the phosphorylated transcription factor c-Fos. In the cytosol, EGF induces transient and HRG induces sustained ERK activation. In the nucleus, however, ERK activity and c-fos mRNA expression are transient for both ligands. Knockdown of dual-specificity phosphatases extends HRG-stimulated nuclear ERK activation, but not c-fos mRNA expression, implying the existence of a HRG-induced repressor of c-fos transcription. Further experiments confirmed that this repressor is mainly induced by HRG, but not EGF, and requires new protein synthesis. We show how a spatially distributed, signaling-transcription cascade robustly discriminates between transient and sustained ERK activities at the c-Fos system level. The proposed control mechanisms are general and operate in different cell types, stimulated by various ligands.
Id Name JWS model
model0_nakakuki1 nakakuki1 nakakuki1
model1_nakakuki1 nakakuki1 nakakuki1
Id Name Source Number of Data Sources
Id Name Model Simulation Simulation Simulation
task0_model0_nakakuki1 nakakuki1 0.0 5500.0 1000
task1_model1_nakakuki1 nakakuki1 0.0 5500.0 1000

2D Plots

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Figure_1F Figure 1F 2
Figure_1G Figure 1G 2
Figure_1H Figure 1H 2
Figure_1I Figure 1I 2

CSV Reports

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