levering2012_Fig5

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Model for Pi = 50 mM

Model Manuscripts

Role of phosphate in the central metabolism of two lactic acid bacteria--a comparative systems biology approach.

  • Jennifer Levering
  • Mark W J M Musters
  • Martijn Bekker
  • Domenico Bellomo
  • Tomas Fiedler
  • Willem M de Vos
  • Jeroen Hugenholtz
  • Bernd Kreikemeyer
  • Ursula Kummer
  • Bas Teusink
FEBS J. 2012; 279 (7): 1274-1290
Abstract
Lactic acid-producing bacteria survive in distinct environments, but show common metabolic characteristics. Here we studied the dynamic interactions of the central metabolism in Lactococcus lactis, extensively used as a starter culture in the dairy industry, and Streptococcus pyogenes, a human pathogen. Glucose-pulse experiments and enzymatic measurements were performed to parameterize kinetic models of glycolysis. Significant improvements were made to existing kinetic models for L. lactis, which subsequently accelerated the development of the first kinetic model of S. pyogenes glycolysis. The models revealed an important role for extracellular phosphate in the regulation of central metabolism and the efficient use of glucose. Thus, phosphate, which is rarely taken into account as an independent species in models of central metabolism, should be considered more thoroughly in the analysis of metabolic systems in the future. Insufficient phosphate supply can lead to a strong inhibition of glycolysis at high glucose concentrations in both species, but this was more severe in S. pyogenes. S. pyogenes is more efficient at converting glucose to ATP, showing a higher tendency towards heterofermentative energy metabolism than L. lactis. Our comparative systems biology approach revealed that the glycolysis of L. lactis and S. pyogenes have similar characteristics, but are adapted to their individual natural habitats with respect to phosphate regulation.
Id Name JWS model
model0_levering2 levering2 levering2
model1_levering2 levering2 levering2
model2_levering2 levering2 levering2
model3_levering2 levering2 levering2
Id Name Source Number of Data Sources
Id Name Model Simulation Simulation Simulation
task0_model0_levering2 levering2 0.0 1500.0 1000
task1_model1_levering2 levering2 0.0 1500.0 1000
task2_model2_levering2 levering2 0.0 1500.0 1000
task3_model3_levering2 levering2 0.0 1500.0 1000

2D Plots

Id Name Number of Curves
Figure5B Figure 5B Glucose 1
Figure5D Figure 5D Glc6P 1
Figure5F Figure 5F FBP 1
Figure5H Figure 5H Triose-P 1
Figure5J Figure 5J ATP 1
Figure5L Figure 5L Lactate 1

CSV Reports

Id Name Number of Columns