jiang2007_Fig2

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Model Manuscripts

A kinetic core model of the glucose-stimulated insulin secretion network of pancreatic beta cells.

  • Nan Jiang
  • Roger D Cox
  • John M Hancock
Mamm. Genome 2007; 18 : 508-520
Abstract
The construction and characterization of a core kinetic model of the glucose-stimulated insulin secretion system (GSIS) in pancreatic beta cells is described. The model consists of 44 enzymatic reactions, 59 metabolic state variables, and 272 parameters. It integrates five subsystems: glycolysis, the TCA cycle, the respiratory chain, NADH shuttles, and the pyruvate cycle. It also takes into account compartmentalization of the reactions in the cytoplasm and mitochondrial matrix. The model shows expected behavior in its outputs, including the response of ATP production to starting glucose concentration and the induction of oscillations of metabolite concentrations in the glycolytic pathway and in ATP and ADP concentrations. Identification of choke points and parameter sensitivity analysis indicate that the glycolytic pathway, and to a lesser extent the TCA cycle, are critical to the proper behavior of the system, while parameters in other components such as the respiratory chain are less critical. Notably, however, sensitivity analysis identifies the first reactions of nonglycolytic pathways as being important for the behavior of the system. The model is robust to deletion of malic enzyme activity, which is absent in mouse pancreatic beta cells. The model represents a step toward the construction of a model with species-specific parameters that can be used to understand mouse models of diabetes and the relationship of these mouse models to the human disease state.
Id Name JWS model
model0_jiang1 jiang1 jiang1
Id Name Source Number of Data Sources
Id Name Model Simulation Simulation Simulation
task0_model0_jiang1 jiang1 0.0 1000.0 1000

2D Plots

Id Name Number of Curves
Figure_2_Glucose Figure 2 Glucose 1
Figure_2_ATP Figure 2 ATP 1
Figure_2_ADP Figure 2 ADP 1
Figure_2_F6P Figure 2 F6P 1
Figure_2_FBP Figure 2 FBP 1
Figure_2_GAP Figure 2 GAP 1
Figure_2_Pyruvate Figure 2 Pyruvate 1
Figure_2_Malate Figure 2 Malate 1
Figure_2_Citrate Figure 2 Citrate 1

CSV Reports

Id Name Number of Columns