akman2008_Fig5

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Model Manuscripts

Isoform switching facilitates period control in the Neurospora crassa circadian clock.

  • Ozgur E Akman
  • James Cw Locke
  • Sanyi Tang
  • Isabelle Carré
  • Andrew J Millar
  • David A Rand
Mol. Syst. Biol. 2008; 4 : 164
Abstract
A striking and defining feature of circadian clocks is the small variation in period over a physiological range of temperatures. This is referred to as temperature compensation, although recent work has suggested that the variation observed is a specific, adaptive control of period. Moreover, given that many biological rate constants have a Q(10) of around 2, it is remarkable that such clocks remain rhythmic under significant temperature changes. We introduce a new mathematical model for the Neurospora crassa circadian network incorporating experimental work showing that temperature alters the balance of translation between a short and long form of the FREQUENCY (FRQ) protein. This is used to discuss period control and functionality for the Neurospora system. The model reproduces a broad range of key experimental data on temperature dependence and rhythmicity, both in wild-type and mutant strains. We present a simple mechanism utilising the presence of the FRQ isoforms (isoform switching) by which period control could have evolved, and argue that this regulatory structure may also increase the temperature range where the clock is robustly rhythmic.
Id Name JWS model
model0_akman2 akman2 akman2
Id Name Source Number of Data Sources
Id Name Model Simulation Simulation Simulation
task0_model0_akman2 akman2 0.0 72.0 1000

2D Plots

Id Name Number of Curves
Figure_5_MF Figure 5 MF 1
Figure_5_Total_FRQ Figure 5 Total FRQ 1

CSV Reports

Id Name Number of Columns