brands1
The SBML for this model was obtained from the BioModels database (BioModels ID: BIOMD0000000052) Biomodels notes: A kinetic model of the Maillard reaction occurring in heated monosaccharide-casein system. The model reproduces the simulation depicted in Fig 2 for the Glucose-Casein system. The results shown here were obtained from MathSBML. JWS Online curation: This model was curated by reproducing the figures as described in the BioModels Notes. No additional changes were made.
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| Simulation | |
|---|---|
| brands2002_Fig2 |
Unit definitions have no effect on the numerical analysis of the model. It remains the responsibility of the modeler to ensure the internal numerical consistency of the model. If units are provided, however, the consistency of the model units will be checked.
| Name | Definition | |
|---|---|---|
| — | 0.001 mole | |
| — | 60.0 second |
| Id | Name | Spatial dimensions | Size | |
|---|---|---|---|---|
| compartment | — | 3.0 | 1.0 |
| Id | Name | Initial quantity | Compartment | Fixed | |
|---|---|---|---|---|---|
| AMP | — | 0.0 | compartment | ✘ | |
| Acetic_acid | — | 0.0 | compartment | ✘ | |
| Amadori | — | 0.0 | compartment | ✘ | |
| C5 | — | 0.0 | compartment | ✘ | |
| Cn | — | 0.0 | compartment | ✘ | |
| Formic_acid | — | 0.0 | compartment | ✘ | |
| Fru | — | 0.0 | compartment | ✘ | |
| Glu | — | 160.0 | compartment | ✘ | |
| Melanoidin | — | 0.0 | compartment | ✘ | |
| Triose | — | 0.0 | compartment | ✘ | |
| lys_R | — | 15.0 | compartment | ✘ |
Initial assignments are expressions that are evaluated at time=0. It is not recommended to create initial assignments for all model entities. Restrict the use of initial assignments to cases where a value is expressed in terms of values or sizes of other model entities. Note that it is not permitted to have both an initial assignment and an assignment rule for a single model entity.
| Definition |
|---|
| Id | Name | Objective coefficient | Reaction Equation and Kinetic Law | Flux bounds | |
|---|---|---|---|---|---|
| _J1 | — | Glu > Fru K1 * Glu | |||
| _J10 | — | lys_R + Fru > AMP K10 * Fru * lys_R | |||
| _J11 | — | AMP > Melanoidin K11 * AMP | |||
| _J2 | — | Fru > Glu K2 * Fru | |||
| _J3 | — | Glu > C5 + Formic_acid K3 * Glu | |||
| _J4 | — | Fru > C5 + Formic_acid K4 * Fru | |||
| _J5 | — | Fru > {2.0}Triose K5 * Fru | |||
| _J6 | — | Triose > Cn + Acetic_acid K6 * Triose | |||
| _J7 | — | lys_R + Glu > Amadori K7 * Glu * lys_R | |||
| _J8 | — | Amadori > Acetic_acid + lys_R K8 * Amadori | |||
| _J9 | — | Amadori > AMP K9 * Amadori |
| Id | Value |
|---|
| Id | Value | Reaction | |
|---|---|---|---|
| K1 | 0.01 | _J1 | |
| K2 | 0.00509 | _J2 | |
| K3 | 0.00047 | _J3 | |
| K4 | 0.0011 | _J4 | |
| K5 | 0.00712 | _J5 | |
| K6 | 0.00439 | _J6 | |
| K7 | 0.00018 | _J7 | |
| K8 | 0.11134 | _J8 | |
| K9 | 0.14359 | _J9 | |
| K10 | 0.00015 | _J10 | |
| K11 | 0.12514 | _J11 |
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| Trigger | Assignments |
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