Parameters

NameValue
ADPSUM
alpha
CiPFKATP
CN
CPFKAMP
CPFKATP
CPFKF16BP
CPFKF26BP
F26BP
GLCo
gR
kACEt
KATPASE
kd
kDHAP
KeqADH
KeqAK
KeqALD
KeqENO
KeqG3PDH
KeqGAPDH
KeqGLK
KeqGLT
KeqPGI
KeqPGK
KeqPGM
KeqPYK
KeqTPI
kETOH
KGLYCOGEN
kHigh
KiADHACE
KiADHETOH
KiADHNAD
KiADHNADH
KiPFKATP
kLACTO
kLow
KmADHACE
KmADHETOH
KmADHNAD
KmADHNADH
KmALDDHAP
KmALDF16P
KmALDGAP
KmALDGAPi
KmATP
KmENOP2G
KmENOPEP
KmG3PAG3P
KmG3PAPhi
KmG3PDHADP
KmG3PDHATP
KmG3PDHDHAP
KmG3PDHF16P
KmG3PDHG3P
KmG3PDHNAD
KmG3PDHNADH
KmGAPDHBPG
KmGAPDHGAP
KmGAPDHNAD
KmGAPDHNADH
KmGLKADP
KmGLKATP
KmGLKG6P
KmGLKGLCi
KmGLTGLCi
KmGLTGLCo
KmPDCPYR
KmPFKATP
KmPFKF6P
KmPGIF6P
KmPGIG6P
KmPGKADP
KmPGKATP
KmPGKBPG
KmPGKP3G
KmPGMP2G
KmPGMP3G
KmPYKADP
KmPYKATP
KmPYKPEP
KmPYKPYR
KPFKAMP
KPFKF16BP
KPFKF26BP
kPYR
KSUCC
KTREHALOSE
L0
NADSUM
nATP
ng3p
nPDC
Phi
VmADH
VmAK
VmALD
VmENO
VmG3PA
VmG3PDH
VmGAPDHf
VmGLK
VmGLT
VmPDC
VmPFK
VmPGI
VmPGK
VmPGM
VmPYK

External variables

NameValue
EXTERNAL

Initial conditions

NameInitial value
ACE
ACEo
AMP
ATP
BPG
ETOH
ETOHo
F16P
F6P
G3P
G6P
GLCi
NADH
P2G
P3G
PEP
PYR
TRIO
Enter time period for plotting

Start

End


Select category to be plotted

Select species to be plotted

  • ACE
  • ACEo
  • AMP
  • ATP
  • BPG
  • ETOH
  • ETOHo
  • F16P
  • F6P
  • G3P
  • G6P
  • GLCi
  • NADH
  • P2G
  • P3G
  • PEP
  • PYR
  • TRIO

Select rates to be plotted

  • v[LACTO]
  • v[LACTOi]
  • v[PYR]
  • v[DHAP]
  • v[ACEt]
  • v[ADH]
  • v[AK]
  • v[ALD]
  • v[ATP]
  • v[ENO]
  • v[G3PA]
  • v[G3PDH]
  • v[GAPDH]
  • v[GLK]
  • v[GLT]
  • v[GLYCO]
  • v[PDC]
  • v[PFK]
  • v[PGI]
  • v[PGK]
  • v[PGM]
  • v[PYK]
  • v[SUC]
  • v[Treha]
  • v[ETOH]
  • v[FlowACEo]
  • v[FlowETOHo]

Select functions to be plotted

Functions

  • ADP[t]
  • NAD[t]

Assignments







Select MCA option to be calculated




Start at:
End at:
Number
of steps:

Select the parameter to scan:

v[LACTO]
  • CN
  • kd
  • kLACTO

v[LACTOi]
  • CN
  • kd
  • kLACTO

v[PYR]
  • CN
  • kd
  • kPYR

v[DHAP]
  • CN
  • kd
  • kDHAP
  • KeqTPI

v[ACEt]
  • kACEt
  • kd

v[ADH]
  • kd
  • KeqADH
  • KiADHACE
  • KiADHETOH
  • KiADHNAD
  • KiADHNADH
  • KmADHACE
  • KmADHETOH
  • KmADHNAD
  • KmADHNADH
  • NADSUM
  • VmADH

v[AK]
  • ADPSUM
  • kd
  • KeqAK
  • VmAK

v[ALD]
  • kd
  • KeqALD
  • KeqTPI
  • KmALDDHAP
  • KmALDF16P
  • KmALDGAP
  • KmALDGAPi
  • VmALD

v[ATP]
  • KATPASE
  • kd
  • KmATP
  • nATP

v[ENO]
  • kd
  • KeqENO
  • KmENOP2G
  • KmENOPEP
  • VmENO

v[G3PA]
  • kd
  • KmG3PAG3P
  • KmG3PAPhi
  • Phi
  • VmG3PA

v[G3PDH]
  • ADPSUM
  • kd
  • KeqG3PDH
  • KeqTPI
  • KmG3PDHADP
  • KmG3PDHATP
  • KmG3PDHDHAP
  • KmG3PDHF16P
  • KmG3PDHG3P
  • KmG3PDHNAD
  • KmG3PDHNADH
  • NADSUM
  • ng3p
  • VmG3PDH

v[GAPDH]
  • kd
  • KeqGAPDH
  • KeqTPI
  • KmGAPDHBPG
  • KmGAPDHGAP
  • KmGAPDHNAD
  • KmGAPDHNADH
  • NADSUM
  • VmGAPDHf

v[GLK]
  • ADPSUM
  • kd
  • KeqGLK
  • KmGLKADP
  • KmGLKATP
  • KmGLKG6P
  • KmGLKGLCi
  • VmGLK

v[GLT]
  • alpha
  • GLCo
  • kd
  • KeqGLT
  • KmGLTGLCi
  • KmGLTGLCo
  • VmGLT

v[GLYCO]
  • kd
  • KGLYCOGEN

v[PDC]
  • kd
  • KmPDCPYR
  • nPDC
  • VmPDC

v[PFK]
  • CiPFKATP
  • CPFKAMP
  • CPFKATP
  • CPFKF16BP
  • CPFKF26BP
  • F26BP
  • gR
  • kd
  • KiPFKATP
  • KmPFKATP
  • KmPFKF6P
  • KPFKAMP
  • KPFKF16BP
  • KPFKF26BP
  • L0
  • VmPFK

v[PGI]
  • kd
  • KeqPGI
  • KmPGIF6P
  • KmPGIG6P
  • VmPGI

v[PGK]
  • ADPSUM
  • kd
  • KeqPGK
  • KmPGKADP
  • KmPGKATP
  • KmPGKBPG
  • KmPGKP3G
  • VmPGK

v[PGM]
  • kd
  • KeqPGM
  • KmPGMP2G
  • KmPGMP3G
  • VmPGM

v[PYK]
  • ADPSUM
  • kd
  • KeqPYK
  • KmPYKADP
  • KmPYKATP
  • KmPYKPEP
  • KmPYKPYR
  • VmPYK

v[SUC]
  • kd
  • KSUCC

v[Treha]
  • kd
  • KTREHALOSE

v[ETOH]
  • kd
  • kETOH

v[FlowACEo]
  • kd
  • kLow

v[FlowETOHo]
  • kd
  • kLow
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